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Protein representations: Encoding biological information for machine learning in biocatalysis
information to a numerical input, also called protein representations. These inputs demand approaches for encoding the three distinct biological protein representations - primary and inductive biases. Combined
Medical biotechnology
- 2024 •
- Jimp •
- Link
Rok uplatnění
Jimp - Článek v periodiku v databázi Web of Science
Výsledek na webu
Comparative Visualization of Protein Secondary Structures
of protein chains into the 1D sequential representation the users are able to observe representation helps to reveal the most dynamically changing parts of the protein chain.Background Protein function is...
Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
- 2017 •
- Jimp •
- Link
Rok uplatnění
Jimp - Článek v periodiku v databázi Web of Science
Výsledek na webu
Representation of individual casein fractions in milk of small ruminants
Differences in total milk protein content, differences in the percentage representation of casein in milk protein, and also differences in percentage representation. The total protein content of the milk, ...
Animal and dairy science; (Animal biotechnology to be 4.4)
- 2017 •
- O •
- Link
Rok uplatnění
O - Ostatní výsledky
Výsledek na webu
In the Case of Protosemiosis: Indexicality vs. Iconicity of Proteins
are mostly based on two important presuppositions: agency and a lack of representation of proteins (in analogy to Maran’ s classification of environmental signs). Our approach is focused on representation, that is, we only...
Linguistics
- 2020 •
- Jimp •
- Link
Rok uplatnění
Jimp - Článek v periodiku v databázi Web of Science
Výsledek na webu
AlphaFold Meets De Novo Drug Design: Leveraging Structural Protein Information in Multitarget Molecular Generative Models
on different targets. Incorporating rich protein representations allows the model transformer models to illustrate the validity of using AlphaFold protein representations introduce a multitarget transformer model,...
Biochemistry and molecular biology
- 2024 •
- Jimp •
- Link
Rok uplatnění
Jimp - Článek v periodiku v databázi Web of Science
Výsledek na webu
Influence of the brewing process on the barley protein profile
protein representation was compared. For the comparison of protein profileOur work was focused on identification of proteins within the process of beer production, whereas the main interest was oriented to pro...
CB - Analytická chemie, separace
- 2011 •
- Jx
Rok uplatnění
Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
Use of Graph Theory to Characterize Human and Arthropod Vector Cell Protein Response to Infection With Anaplasma phagocytophilum
processes, the changes in protein representation affected simultaneously different representation of ras-related proteins. This methodological approach could be applied protein response to infection with ...
Microbiology
- 2018 •
- Jimp •
- Link
Rok uplatnění
Jimp - Článek v periodiku v databázi Web of Science
Výsledek na webu
A Description of the Protein Structures by Evolutionary - Prorammed Turing Machine
Proteins belong amongst one of the essential biological structures which of proteins has a form of sequences containing amino-acids which are elements of primary protein structures. This paper is concerned with the descript...
IN - Informatika
- 2011 •
- D
Rok uplatnění
D - Stať ve sborníku
Unfolding and Interactive Exploration of Protein Tunnels and their Dynamics.
The presence of tunnels in protein structures substantially influences their reactivity with other molecules. Therefore, studying their properties and changes over representations while providing users a quick way to navigate throug...
IN - Informatika
- 2016 •
- D •
- Link
Rok uplatnění
D - Stať ve sborníku
Výsledek na webu
Variational Autoencoder-based tool for design of ancestral proteins
protein representations and can guide researchers in producing improved proteinTo streamline the search for protein sequences with desired properties, we leverage information from protein families through...
Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
- 2024 •
- R
Rok uplatnění
R - Software
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