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Nature of Nucleic Acid-Base Stacking: Nonempirical ab Initio and Empirical Potential Characterization of 10 Stacked Base Dimers. Comparison of Stacked and H-Bonded Base Pairs.
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BO - Biofyzika
- 1996 •
- Jx
Rok uplatnění
Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
A note on the mechanism of charge transport at different temperatures in aperiodic nucleotide base-stacks
A note on the mechanism of charge transport at different temperatures in aperiodic nucleotide base-stacks...
BE - Teoretická fyzika
- 2003 •
- Jx
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Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
Aromatic DNA Base Stacking and H-Bonding.
Aromatic stacking of nucleic acid bases is one of the key players bases with extensive overlap of their aromatic rings gave rise to numerous often contradictory suggestions about the physical origins of stacking an...
CF - Fyzikální chemie a teoretická chemie
- 2000 •
- C
Rok uplatnění
C - Kapitola v odborné knize
Aromatic Base Stacking in DNA: From ab initio Calculations to Molecular Dynamics Simulations.
Aromatic stacking of nucleid acid bases is one of the key players bases with extensive overlap of their aromatic rings gave rise to numerous often contradictory suggestions about the physical origins of stacking an...
CF - Fyzikální chemie a teoretická chemie
- 2000 •
- Jx
Rok uplatnění
Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
Free-Energy Simulations of Hydrogen Bonding versus Stacking of Nucleobases on a Graphene Surface
nucleic acid bases form hydrogen-bonded complexes in vacuum but prefer pi-pi stacking the situation from stacking back to hydrogen bonding. Watson-Crick as well as several non-Watson-Crick base pairs lying on a gr...
CF - Fyzikální chemie a teoretická chemie
- 2011 •
- Jx •
- Link
Rok uplatnění
Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
Výsledek na webu
Nature and Magnitude of Aromatic Base Stacking in DNA and RNA: Quantum Chemistry, Molecular Mechanics, and Experiment
Base stacking is a major interaction shaping up and stabilizing nucleic acids. During the last decades, base stacking has been extensively studied by experimental and theoretical methods. Advanced quantum-chemical ...
CF - Fyzikální chemie a teoretická chemie
- 2013 •
- Jx •
- Link
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Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
Výsledek na webu
Base stacking and base pairing. Advanced quantum chemical studies
This chapter summarizes molecular interactions of nucleic acid bases as revealed by advanced ab initio quantum chemical calculations.
BO - Biofyzika
- 2006 •
- C
Rok uplatnění
C - Kapitola v odborné knize
A-like Guanine-Guanine Stacking in the Aqueous DNA
A-like stacking of half of the bases, whereas the other half stack in a B-like, the hole does not exist at all because the base-pairs cross the double-helix centre. The cytosine bases were stacked
CE - Biochemie
- 2001 •
- Jx
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Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
Base pair stacking in nucleosome DNA and bendability sequence pattern
DNA deformation in the nucleosome involves partial unstacking between bases and base pairs. By adjusting orientations of different base-pair stacks relative to the histone octamer surface, the optimal set of st...
EB - Genetika a molekulární biologie
- 2009 •
- Jx
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Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
Local Conformational Variations Observed in B-DNA Crystals do not Improve Base Stacking: Computational Analysis of Base Stacking in a d(CATGGGCCCATG) 2 B<->A Intermediate Crystal Structure.
Annotation not available...
CF - Fyzikální chemie a teoretická chemie
- 2000 •
- Jx
Rok uplatnění
Jx - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)
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