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Analysis of Czech Genomes for Theranostics

Public support

  • Provider

    Ministry of Education, Youth and Sports

  • Programme

  • Call for proposals

  • Main participants

    Masarykova univerzita / Středoevropský technologický institut

  • Contest type

    OP - EU Operational Programme

  • Contract ID

    16_026/0008448-01

Alternative language

  • Project name in Czech

    Analýza českých genomů pro teranostiku

  • Annotation in Czech

    Cílem projektu je vytvoření národní referenční databáze - nástroje, který bude napovat genetickou variabilitu české populace. Na vzorku 1000 zdravých obyvatel bude provedeno celogenomové sekvenování a nasledně analýza získaných dat. Identifikované varianty budou spolu s jejich frekvencí v populaci vloženy do databáze. Tato data jsou nezbytná pro správnou interpretaci diagnostickách genetickách testů.

Scientific branches

  • R&D category

    ZV - Basic research

  • OECD FORD - main branch

    10603 - Genetics and heredity (medical genetics to be 3)

  • OECD FORD - secondary branch

    30101 - Human genetics

  • OECD FORD - another secondary branch

  • CEP - equivalent branches <br>(according to the <a href="http://www.vyzkum.cz/storage/att/E6EF7938F0E854BAE520AC119FB22E8D/Prevodnik_oboru_Frascati.pdf">converter</a>)

    EB - Genetics and molecular biology

Completed project evaluation

  • Provider evaluation

    V - Vynikající výsledky projektu (s mezinárodním významem atd.)

  • Project results evaluation

    There was developed a strategy for cooperation between organisations in the field of R&D. There was set up Intersectoral cooperation and rules for employees in cooperation with research organisations. Good laboratory practice guidelines were developed for the collection and management of clinical samples, the evaluation and interpretation of data for use in the clinical setting, a code of ethics for the management of sample identification and guidelines on ethical issues related to the genome. Project research has mainly involved the preparation of libraries for whole-genome sequencing, in-depth analysis of structural variants in whole-genome sequences, and digitization of data and metadata from collected samples. Collaboration in partnership among research organisations and the application sphere enables better transfer of knowledge and experience of the project, increases the standard of genomic methods and facilitates their dissemination in clinical practice.

Solution timeline

  • Realization period - beginning

    Jan 1, 2019

  • Realization period - end

    Jun 30, 2023

  • Project status

    U - Finished project

  • Latest support payment

    Sep 6, 2020

Data delivery to CEP

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

  • Data delivery code

    CEP24-MSM-EF-U

  • Data delivery date

    Jul 1, 2024

Finance

  • Total approved costs

    73,378 thou. CZK

  • Public financial support

    73,378 thou. CZK

  • Other public sources

    0 thou. CZK

  • Non public and foreign sources

    0 thou. CZK