Genetic diversity of porcine sapoviruses, kobuviruses, and astroviruses in asymptomatic pigs: an emerging new sapovirus GIII genotype

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00027162%3A_____%2F13%3A%230000971" target="_blank" >RIV/00027162:_____/13:#0000971 - isvavai.cz</a>

Alternative codes found

RIV/00216224:14310/13:00107110

Result on the web

<a href="http://dx.doi.org/10.1007/s00705-012-1528-z" target="_blank" >http://dx.doi.org/10.1007/s00705-012-1528-z</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1007/s00705-012-1528-z" target="_blank" >10.1007/s00705-012-1528-z</a>

Result language

angličtina

Original language name

Genetic diversity of porcine sapoviruses, kobuviruses, and astroviruses in asymptomatic pigs: an emerging new sapovirus GIII genotype

Original language description

Small, non-enveloped RNA viruses belonging to the genera Sapovirus, Kobuvirus, and Mamastrovirus are usually associated with gastroenteritis in humans and animals. These enteric pathogens are considered potential zoonotic agents. In this study, the prevalence and genetic diversity of sapoviruses (SaVs), kobuviruses (KoVs), and astroviruses (AstVs) in asymptomatic pigs were investigated using a PCR approach. KoV was found to be the most prevalent virus (87.3 %), followed by AstV (34.2 %) and SaV (10.2 %). Interestingly, the intra- and inter-cluster distances between porcine SaV capsid sequences revealed one strain (P38/11/CZ) that formed a new genotype within genogroup III of porcine SaVs, and it is tentatively called "P38/11-like" genotype. Moreover, this is the first report of porcine kobuvirus detection on Czech pig farms. The high prevalence rate of gastroenteritis-producing viruses in clinically healthy pigs represents a continuous source of infection of pigs, and possibly to human

Czech name

—

Czech description

—

Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

EE - Microbiology, virology

OECD FORD branch

—

Project

Result was created during the realization of more than one project. More information in the Projects tab.

Continuities

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year

2013

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

ARCHIVES OF VIROLOGY

ISSN

0304-8608

e-ISSN

—

Volume of the periodical

158

Issue of the periodical within the volume

3

Country of publishing house

AT - AUSTRIA

Number of pages

10

Pages from-to

549-558

UT code for WoS article

000315561900004

EID of the result in the Scopus database

—