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Genetic diversity of porcine sapoviruses, kobuviruses, and astroviruses in asymptomatic pigs: an emerging new sapovirus GIII genotype

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14310%2F13%3A00107110" target="_blank" >RIV/00216224:14310/13:00107110 - isvavai.cz</a>

  • Alternative codes found

    RIV/00027162:_____/13:#0000971

  • Result on the web

    <a href="https://link.springer.com/content/pdf/10.1007%2Fs00705-012-1528-z.pdf" target="_blank" >https://link.springer.com/content/pdf/10.1007%2Fs00705-012-1528-z.pdf</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1007/s00705-012-1528-z" target="_blank" >10.1007/s00705-012-1528-z</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Genetic diversity of porcine sapoviruses, kobuviruses, and astroviruses in asymptomatic pigs: an emerging new sapovirus GIII genotype

  • Original language description

    Small, non-enveloped RNA viruses belonging to the genera Sapovirus, Kobuvirus, and Mamastrovirus are usually associated with gastroenteritis in humans and animals. These enteric pathogens are considered potential zoonotic agents. In this study, the prevalence and genetic diversity of sapoviruses (SaVs), kobuviruses (KoVs), and astroviruses (AstVs) in asymptomatic pigs were investigated using a PCR approach. KoV was found to be the most prevalent virus (87.3 %), followed by AstV (34.2 %) and SaV (10.2 %). Interestingly, the intra- and inter-cluster distances between porcine SaV capsid sequences revealed one strain (P38/11/CZ) that formed a new genotype within genogroup III of porcine SaVs, and it is tentatively called "P38/11-like" genotype. Moreover, this is the first report of porcine kobuvirus detection on Czech pig farms. The high prevalence rate of gastroenteritis-producing viruses in clinically healthy pigs represents a continuous source of infection of pigs, and possibly to humans.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database

  • CEP classification

  • OECD FORD branch

    10607 - Virology

Result continuities

  • Project

  • Continuities

    I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2013

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Archives of Virology

  • ISSN

    0304-8608

  • e-ISSN

  • Volume of the periodical

    158

  • Issue of the periodical within the volume

    3

  • Country of publishing house

    AT - AUSTRIA

  • Number of pages

    10

  • Pages from-to

    549-558

  • UT code for WoS article

    000315561900004

  • EID of the result in the Scopus database

    2-s2.0-84874667599