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SBILib: a handle for protein modeling and engineering

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00159816%3A_____%2F23%3A00081783" target="_blank" >RIV/00159816:_____/23:00081783 - isvavai.cz</a>

  • Alternative codes found

    RIV/00216224:14310/23:00132020

  • Result on the web

    <a href="https://academic.oup.com/bioinformatics/article/39/10/btad613/7291855#421876479" target="_blank" >https://academic.oup.com/bioinformatics/article/39/10/btad613/7291855#421876479</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1093/bioinformatics/btad613" target="_blank" >10.1093/bioinformatics/btad613</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    SBILib: a handle for protein modeling and engineering

  • Original language description

    The SBILib Python library provides an integrated platform for the analysis of macromolecular structures and interactions. It combines simple 3D file parsing and workup methods with more advanced analytical tools. SBILib includes modules for macromolecular interactions, loops, super-secondary structures, and biological sequences, as well as wrappers for external tools with which to integrate their results and facilitate the comparative analysis of protein structures and their complexes. The library can handle macromolecular complexes formed by proteins and/or nucleic acid molecules (i.e. DNA and RNA). It is uniquely capable of parsing and calculating protein super-secondary structure and loop geometry. We have compiled a list of example scenarios which SBILib may be applied to and provided access to these within the library. Availability and implementation: SBILib is made available on Github at https://github.com/structuralbioinformatics/SBILib.

  • Czech name

    —

  • Czech description

    —

Classification

  • Type

    J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database

  • CEP classification

    —

  • OECD FORD branch

    10600 - Biological sciences

Result continuities

  • Project

    —

  • Continuities

    I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2023

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Bioinformatics

  • ISSN

    1367-4803

  • e-ISSN

    1367-4811

  • Volume of the periodical

    39

  • Issue of the periodical within the volume

    10

  • Country of publishing house

    US - UNITED STATES

  • Number of pages

    3

  • Pages from-to

    —

  • UT code for WoS article

    001188979400013

  • EID of the result in the Scopus database

    —