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flowIO: Flow cytometry standard conformance testing, editing, and export tool

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216208%3A11130%2F18%3A10380118" target="_blank" >RIV/00216208:11130/18:10380118 - isvavai.cz</a>

  • Alternative codes found

    RIV/00064203:_____/18:10380118

  • Result on the web

    <a href="https://doi.org/10.1002/cyto.a.23563" target="_blank" >https://doi.org/10.1002/cyto.a.23563</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1002/cyto.a.23563" target="_blank" >10.1002/cyto.a.23563</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    flowIO: Flow cytometry standard conformance testing, editing, and export tool

  • Original language description

    The Flow Cytometry Standard (FCS) format is a widely accepted norm for storing Flow Cytometry (FCM) data. Its goal as a standard is to allow FCM data sharing and re-analysis. Over more than three decades of its existence FCS has evolved into a well-defined, flexible file format reflecting technical changes in the FCM field. Its flexibility as well as rising numbers of instrument vendors leads to suboptimal implementations of FCS in some cases. Such situations compromise the primary goal of the standard and hinder the ability to reproduce FCM analyses. It is further underlined by rapid rise of advanced FCM analyses, often carried out outside traditional software tools and heavily relying on standard data storage and presentation. We have developed flowIO, an R package which tests FCS file conformance with the standard as defined by International Society for Advancement of Cytometry (ISAC) normative. Along with the package we provide a web based application (also at ) allowing user friendly access to the conformance testing as well as FCS file editing and export for further analysis.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database

  • CEP classification

  • OECD FORD branch

    30204 - Oncology

Result continuities

  • Project

    Result was created during the realization of more than one project. More information in the Projects tab.

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2018

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Cytometry Part A

  • ISSN

    1552-4922

  • e-ISSN

  • Volume of the periodical

    93A

  • Issue of the periodical within the volume

    8

  • Country of publishing house

    US - UNITED STATES

  • Number of pages

    6

  • Pages from-to

    848-853

  • UT code for WoS article

    000444461900010

  • EID of the result in the Scopus database

    2-s2.0-85053215502