SimTandem: Similarity Search in Tandem Mass Spectra

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216208%3A11320%2F12%3A10124005" target="_blank" >RIV/00216208:11320/12:10124005 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.1007/978-3-642-32153-5_18" target="_blank" >http://dx.doi.org/10.1007/978-3-642-32153-5_18</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1007/978-3-642-32153-5_18" target="_blank" >10.1007/978-3-642-32153-5_18</a>

Result language
angličtina
Original language name
SimTandem: Similarity Search in Tandem Mass Spectra
Original language description
SimTandem is a tool for fast identification of protein and peptide sequences from tandem mass spectra. The identification is based on similarity search of spectra captured by a tandem mass spectrometer in databases of theoretical mass spectra generated from databases of known protein sequences. Since the number of protein sequences in the databases grows rapidly and a sequential scan over the entire database of spectra is time-consuming, the non-metric access methods are employed as the database indexing techniques. SimTandem is based on a previously proposed method and is freely available at http://www.simtandem.org or http://www.siret.cz/simtandem.
Czech name
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Czech description
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Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
IN - Informatics
OECD FORD branch
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Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach

Publication year
2012
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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