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Bacteria profiling by MALDI-MS: The influence of sample preparation on distinguishing closely related Pseudomonas species

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14310%2F07%3A00022179" target="_blank" >RIV/00216224:14310/07:00022179 - isvavai.cz</a>

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    Bacteria profiling by MALDI-MS: The influence of sample preparation on distinguishing closely related Pseudomonas species

  • Original language description

    In this work we examined numerous influences of particular sample preparation steps to observe whether their variation may affect the final output of data processing.Direct MALDI-MS analysis of bacteria extracts with subsequent evaluation using spectra libraries represents a new and rapid technique for microorganism identification. Numerous laboratories have developed approaches leading to successful distinguishing of desired bacteria strains; however, there are several differences in described sample treatment protocols, which might delimit their universality.The genus Pseudomonas (Prokaryotes, Proteobacteria, Gammaproteobacteria) can be an example of environmentally and clinically important genus with complicated and evolving taxonomy and problematically distinguishable species. The genus is phylogenetically very heterogeneous and comprises species ubiquitous in soil and water ecosystems and important as plant, animal and human pathogens.

  • Czech name

  • Czech description

Classification

  • Type

    O - Miscellaneous

  • CEP classification

    EE - Microbiology, virology

  • OECD FORD branch

Result continuities

  • Project

    <a href="/en/project/LC06034" target="_blank" >LC06034: Regulation of morphogenesis of plant cells and organs</a><br>

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)

Others

  • Publication year

    2007

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů