Software tools for identification, visualization and analysis of protein tunnels and channels
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14310%2F13%3A00065808" target="_blank" >RIV/00216224:14310/13:00065808 - isvavai.cz</a>
Alternative codes found
RIV/00159816:_____/13:00063742
Result on the web
<a href="http://dx.doi.org/10.1016/j.biotechadv.2012.02.002" target="_blank" >http://dx.doi.org/10.1016/j.biotechadv.2012.02.002</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1016/j.biotechadv.2012.02.002" target="_blank" >10.1016/j.biotechadv.2012.02.002</a>
Alternative languages
Result language
angličtina
Original language name
Software tools for identification, visualization and analysis of protein tunnels and channels
Original language description
Protein structures contain highly complex systems of voids, making up specific features such as surface clefts or grooves, pockets, protrusions, cavities, pores or channels, and tunnels. Many of them are essential for the migration of solvents, ions andsmall molecules through proteins, and their binding to the functional sites. Analysis of these structural features is very important for understanding of structure-function relationships, for the design of potential inhibitors or proteins with improved functional properties. Here we critically review existing software tools specialized in rapid identification, visualization, analysis and design of protein tunnels and channels. The strengths and weaknesses of individual tools are reported together with examples of their applications for the analysis and engineering of various biological systems.
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
CE - Biochemistry
OECD FORD branch
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Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2013
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
BIOTECHNOLOGY ADVANCES
ISSN
0734-9750
e-ISSN
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Volume of the periodical
31
Issue of the periodical within the volume
1
Country of publishing house
US - UNITED STATES
Number of pages
12
Pages from-to
38-49
UT code for WoS article
000315761200004
EID of the result in the Scopus database
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