Genes associated with biological nitrogen fixation identified using RNAsequencing in red clover (Trifolium pratense L.)

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14310%2F21%3A00119861" target="_blank" >RIV/00216224:14310/21:00119861 - isvavai.cz</a>
Result on the web
<a href="https://fns.uniba.sk/fileadmin/prif/svk/zborniky/Zbornik2021.pdf" target="_blank" >https://fns.uniba.sk/fileadmin/prif/svk/zborniky/Zbornik2021.pdf</a>
DOI - Digital Object Identifier
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Result language
angličtina
Original language name
Genes associated with biological nitrogen fixation identified using RNAsequencing in red clover (Trifolium pratense L.)
Original language description
Biological nitrogen fixation (BNF), commonly studied in the context of legume-Rhizobia symbiosis, is a key component of the nitrogen cycle in nature and efforts to use this process include e.g. utilization of plants as a natural fertilizers or generating crops with BNF using bioengineering. Despite the potential of using this process in plant breeding and many years of research, there is still a lack of information on the regulation of dozens and hundreds of genes connected with BNF. Here, we compared a root nodule transcriptome of red clover (Trifolium pratense L.) genotypes with contrast nitrogen fixation efficacy and by performing differential gene expression analysis we found 491 genes differentially expressed (DE) between plants with high and low BNF efficiency. Following annotation of DE genes revealed their function and enabled their connection with biosynthetic pathways. Overall, these results broaden our knowledge about transcriptomic landscape of red clover root nodules and connect the phenotypic trait of BNF efficiency with gene expression levels in situ.
Czech name
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Czech description
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Project
<a href="/en/project/TH02010351" target="_blank" >TH02010351: The effective biotechnology for population chip synthesis as well as its verification on the pilot plant material matrix</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year
2021
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Article name in the collection
Študentská vedecká konferencia PriF UK 2021: zborník recenzovaných príspevkov
ISBN
9788022351324
ISSN
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e-ISSN
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Number of pages
6
Pages from-to
498-503
Publisher name
Univerzita Komenského v Bratislave
Place of publication
Bratislava
Event location
Bratislava
Event date
Apr 21, 2021
Type of event by nationality
EUR - Evropská akce
UT code for WoS article
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