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A Two-Phase Segmentation of Cell Nuclei Using Fast Level Set-Like Algorithms

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F09%3A00034316" target="_blank" >RIV/00216224:14330/09:00034316 - isvavai.cz</a>

  • Alternative codes found

    RIV/00216224:14330/09:00067108

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    A Two-Phase Segmentation of Cell Nuclei Using Fast Level Set-Like Algorithms

  • Original language description

    An accurate localization of a cell nucleus boundary is inevitable for any further quantitative analysis of various subnuclear structures within the cell nucleus. In this paper, we present a novel approach to the cell nucleus segmentation in fluorescencemicroscope images exploiting the level set framework. The proposed method works in two phases. In the first phase, the image foreground is separated from the background using a fast level set-like algorithm by Nilsson and Heyden (2003). A binary mask ofisolated cell nuclei as well as their clusters is obtained as a result of the first phase. A fast topology-preserving level set-like algorithm by Maška and Matula (2008) is applied in the second phase to delineate individual cell nuclei within the clusters. The potential of the new method is demonstrated on images of DAPI-stained nuclei of a lung cancer cell line A549 and promyelocytic leukemia cell line HL60.

  • Czech name

  • Czech description

Classification

  • Type

    D - Article in proceedings

  • CEP classification

    IN - Informatics

  • OECD FORD branch

Result continuities

  • Project

    Result was created during the realization of more than one project. More information in the Projects tab.

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)

Others

  • Publication year

    2009

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Article name in the collection

    16th Scandinavian Conference on Image Analysis

  • ISBN

    978-3-642-02229-6

  • ISSN

  • e-ISSN

  • Number of pages

    10

  • Pages from-to

  • Publisher name

    Springer-Verlag

  • Place of publication

    Berlin, Heidelberg

  • Event location

    Oslo

  • Event date

    Jun 15, 2009

  • Type of event by nationality

    WRD - Celosvětová akce

  • UT code for WoS article

    000268661000040