A Two-Phase Segmentation of Cell Nuclei Using Fast Level Set-Like Algorithms
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F09%3A00034316" target="_blank" >RIV/00216224:14330/09:00034316 - isvavai.cz</a>
Alternative codes found
RIV/00216224:14330/09:00067108
Result on the web
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DOI - Digital Object Identifier
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Alternative languages
Result language
angličtina
Original language name
A Two-Phase Segmentation of Cell Nuclei Using Fast Level Set-Like Algorithms
Original language description
An accurate localization of a cell nucleus boundary is inevitable for any further quantitative analysis of various subnuclear structures within the cell nucleus. In this paper, we present a novel approach to the cell nucleus segmentation in fluorescencemicroscope images exploiting the level set framework. The proposed method works in two phases. In the first phase, the image foreground is separated from the background using a fast level set-like algorithm by Nilsson and Heyden (2003). A binary mask ofisolated cell nuclei as well as their clusters is obtained as a result of the first phase. A fast topology-preserving level set-like algorithm by Maška and Matula (2008) is applied in the second phase to delineate individual cell nuclei within the clusters. The potential of the new method is demonstrated on images of DAPI-stained nuclei of a lung cancer cell line A549 and promyelocytic leukemia cell line HL60.
Czech name
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Czech description
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Classification
Type
D - Article in proceedings
CEP classification
IN - Informatics
OECD FORD branch
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Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)
Others
Publication year
2009
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Article name in the collection
16th Scandinavian Conference on Image Analysis
ISBN
978-3-642-02229-6
ISSN
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e-ISSN
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Number of pages
10
Pages from-to
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Publisher name
Springer-Verlag
Place of publication
Berlin, Heidelberg
Event location
Oslo
Event date
Jun 15, 2009
Type of event by nationality
WRD - Celosvětová akce
UT code for WoS article
000268661000040