Generation of 3D Digital Phantoms of Colon Tissue

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F11%3A00052210" target="_blank" >RIV/00216224:14330/11:00052210 - isvavai.cz</a>
Alternative codes found
RIV/00216224:14330/11:00067276
Result on the web
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DOI - Digital Object Identifier
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Result language
angličtina
Original language name
Generation of 3D Digital Phantoms of Colon Tissue
Original language description
Although segmentation of biomedical image data has been paid a lot of attention for many years, this crucial task still meets the problem of the correctness of the obtained results. Especially in the case of optical microscopy, the ground truth (GT), which is a very important tool for the validation of image processing algorithms, is not available. We have developed a toolkit that generates fully 3D digital phantoms, that represent the structure of the studied biological objects. While former papers concentrated on the modelling of isolated cells (such as blood cells), this work focuses on a representative of tissue image type, namely human colon tissue. This phantom image can be submitted to the engine that simulates the image acquisition process. Such synthetic image can be further processed, e.g. deconvolved or segmented. The results can be compared with the GT derived from the digital phantom and the quality of the applied algorithm can be measured.
Czech name
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Czech description
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Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year
2011
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Article name in the collection
Proceedings of 8th International Conference on Image Analysis and Recognition
ISBN
978-3-642-21595-7
ISSN
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e-ISSN
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Number of pages
9
Pages from-to
31-39
Publisher name
Springer-Verlag
Place of publication
Berlin, Heidelberg
Event location
Burnaby, BC, Canada
Event date
Jun 22, 2011
Type of event by nationality
WRD - Celosvětová akce
UT code for WoS article
000300562000004

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