Segmentation and Shape Tracking of Whole Fluorescent Cells Based on the Chan-Vese Model
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F13%3A00081861" target="_blank" >RIV/00216224:14330/13:00081861 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.1109/TMI.2013.2243463" target="_blank" >http://dx.doi.org/10.1109/TMI.2013.2243463</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1109/TMI.2013.2243463" target="_blank" >10.1109/TMI.2013.2243463</a>
Alternative languages
Result language
angličtina
Original language name
Segmentation and Shape Tracking of Whole Fluorescent Cells Based on the Chan-Vese Model
Original language description
We present a fast and robust approach to tracking the evolving shape of whole fluorescent cells in time-lapse series. The proposed tracking scheme involves two steps. First, coherence-enhancing diffusion filtering is applied on each frame to reduce the amount of noise and enhance flow-like structures. Second, the cell boundaries are detected by minimizing the Chan?Vese model in the fast level set-like and graph cut frameworks. To allow simultaneous tracking of multiple cells over time, both frameworks have been integrated with a topological prior exploiting the object indication function. The potential of the proposed tracking scheme and the advantages and disadvantages of both frameworks are demonstrated on 2-D and 3-D time-lapse series of rat adipose-derived mesenchymal stem cells and human lung squamous cell carcinoma cells, respectively.
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
EA - Morphology and cytology
OECD FORD branch
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Result continuities
Project
<a href="/en/project/EE2.3.30.0009" target="_blank" >EE2.3.30.0009: Employment of Newly Graduated Doctors of Science for Scientific Excellence</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2013
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
IEEE Transactions on Medical Imaging
ISSN
0278-0062
e-ISSN
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Volume of the periodical
32
Issue of the periodical within the volume
6
Country of publishing house
US - UNITED STATES
Number of pages
12
Pages from-to
995-1006
UT code for WoS article
000319701800003
EID of the result in the Scopus database
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