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Cell Tracking based on Integer Linear Programming and Probability Scores

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F24%3A00135682" target="_blank" >RIV/00216224:14330/24:00135682 - isvavai.cz</a>

  • Result on the web

    <a href="http://dx.doi.org/10.1109/ISBI56570.2024.10635857" target="_blank" >http://dx.doi.org/10.1109/ISBI56570.2024.10635857</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1109/ISBI56570.2024.10635857" target="_blank" >10.1109/ISBI56570.2024.10635857</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Cell Tracking based on Integer Linear Programming and Probability Scores

  • Original language description

    The cell tracking problem can be formulated as a global optimization problem based on integer linear (IL) programming. The obtained solution depends on the definition of the IL program and the chosen costs of the events considered in the problem formulation. In general, balancing meaningful costs across different events is difficult. To simplify this problem, we propose a cost assignment approach based on probability scores, allowing us to easily interpret the free parameters. The idea is presented based on the BF-C2DL-HSC dataset from the Cell Tracking Challenge. We show our method reaches state-of-the-art performance when evaluating both technical and biological tracking measures.

  • Czech name

  • Czech description

Classification

  • Type

    D - Article in proceedings

  • CEP classification

  • OECD FORD branch

    10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)

Result continuities

  • Project

    <a href="/en/project/GA21-20374S" target="_blank" >GA21-20374S: Segmentation and tracking of cells with complex shapes</a><br>

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2024

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Article name in the collection

    Athens, Greece, IEEE 21th International Symposium on Biomedical Imaging

  • ISBN

    9798350313345

  • ISSN

    1945-7928

  • e-ISSN

    1945-8452

  • Number of pages

    5

  • Pages from-to

    1-5

  • Publisher name

    IEEE 21th International Symposium on Biomedical Imaging

  • Place of publication

    Athens

  • Event location

    Athens

  • Event date

    Jan 1, 2024

  • Type of event by nationality

    WRD - Celosvětová akce

  • UT code for WoS article

    001305705103157