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Variation of 45S rDNA intergenic spacers in Arabidopsis thaliana

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14740%2F16%3A00088684" target="_blank" >RIV/00216224:14740/16:00088684 - isvavai.cz</a>

  • Alternative codes found

    RIV/68081707:_____/16:00506641

  • Result on the web

    <a href="http://link.springer.com/article/10.1007%2Fs11103-016-0524-1" target="_blank" >http://link.springer.com/article/10.1007%2Fs11103-016-0524-1</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1007/s11103-016-0524-1" target="_blank" >10.1007/s11103-016-0524-1</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Variation of 45S rDNA intergenic spacers in Arabidopsis thaliana

  • Original language description

    Approximately seven hundred 45S rRNA genes (rDNA) in the Arabidopsis thaliana genome are organised in two 4 Mbp-long arrays of tandem repeats arranged in head-to-tail fashion separated by an intergenic spacer (IGS). These arrays make up 5 % of the A. thaliana genome. IGS are rapidly evolving sequences and frequent rearrangements inside the rDNA loci have generated considerable interspecific and even intra-individual variability which allows to distinguish among otherwise highly conserved rRNA genes. The IGS has not been comprehensively described despite its potential importance in regulation of rDNA transcription and replication. Here we describe the detailed sequence variation in the complete IGS of A. thaliana WT plants and provide the reference/consensus IGS sequence, as well as genomic DNA analysis.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

  • CEP classification

    EB - Genetics and molecular biology

  • OECD FORD branch

Result continuities

  • Project

    Result was created during the realization of more than one project. More information in the Projects tab.

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Others

  • Publication year

    2016

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Plant Molecular Biology

  • ISSN

    0167-4412

  • e-ISSN

  • Volume of the periodical

    92

  • Issue of the periodical within the volume

    4-5

  • Country of publishing house

    NL - THE KINGDOM OF THE NETHERLANDS

  • Number of pages

    15

  • Pages from-to

    457-471

  • UT code for WoS article

    000387114900005

  • EID of the result in the Scopus database