PDBe: improved findability of macromolecular structure data in the PDB
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14740%2F20%3A00117897" target="_blank" >RIV/00216224:14740/20:00117897 - isvavai.cz</a>
Result on the web
<a href="https://doi.org/10.1093/nar/gkz990" target="_blank" >https://doi.org/10.1093/nar/gkz990</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1093/nar/gkz990" target="_blank" >10.1093/nar/gkz990</a>
Alternative languages
Result language
angličtina
Original language name
PDBe: improved findability of macromolecular structure data in the PDB
Original language description
The Protein Data Bank in Europe (PDBe), a founding member of the Worldwide Protein Data Bank (wwPDB), actively participates in the deposition, curation, validation, archiving and dissemination of macromolecular structure data. PDBe supports diverse research communities in their use of macromolecular structures by enriching the PDB data and by providing advanced tools and services for effective data access, visualization and analysis. This paper details the enrichment of data at PDBe, including mapping of RNA structures to Rfam, and identification of molecules that act as cofactors. PDBe has developed an advanced search facility with similar to 100 data categories and sequence searches. New features have been included in the LiteMol viewer at PDBe, with updated visualization of carbohydrates and nucleic acids. Small molecules are now mapped more extensively to external databases and their visual representation has been enhanced. These advances help users to more easily find and interpret macromolecular structure data in order to solve scientific problems.
Czech name
—
Czech description
—
Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
—
OECD FORD branch
10608 - Biochemistry and molecular biology
Result continuities
Project
<a href="/en/project/EF16_013%2F0001777" target="_blank" >EF16_013/0001777: ELIXIR-CZ: Capacity building</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2020
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Nucleic acids research
ISSN
0305-1048
e-ISSN
1362-4962
Volume of the periodical
48
Issue of the periodical within the volume
D1
Country of publishing house
GB - UNITED KINGDOM
Number of pages
9
Pages from-to
„D335“-„D343“
UT code for WoS article
000525956700047
EID of the result in the Scopus database
2-s2.0-85077669911