KEC: unique sequence search by K-mer exclusion

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60076658%3A12220%2F21%3A43902873" target="_blank" >RIV/60076658:12220/21:43902873 - isvavai.cz</a>
Result on the web
<a href="https://academic.oup.com/bioinformatics/article/37/19/3349/6182676?login=true" target="_blank" >https://academic.oup.com/bioinformatics/article/37/19/3349/6182676?login=true</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1093/bioinformatics/btab196" target="_blank" >10.1093/bioinformatics/btab196</a>

Result language
angličtina
Original language name
KEC: unique sequence search by K-mer exclusion
Original language description
Searching for amino acid or nucleic acid sequences unique to one organism may be challenging depending on size of the available datasets. K-mer elimination by cross-reference (KEC) allows users to quickly and easily find unique sequences by providing target and non-target sequences. Due to its speed, it can be used for datasets of genomic size and can be run on desktop or laptop computers with modest specifications.
Czech name
—
Czech description
—

Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
—
OECD FORD branch
10602 - Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology

Project
<a href="/en/project/LTC19014" target="_blank" >LTC19014: Detection of tomato related xanthomonads using loop-mediated isothermal amplification</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach

Publication year
2021
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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