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Regulation of the transient receptor potential channel TRPA1 by its N-terminal ankyrin repeat domain

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60076658%3A12310%2F13%3A43883860" target="_blank" >RIV/60076658:12310/13:43883860 - isvavai.cz</a>

  • Alternative codes found

    RIV/67179843:_____/12:00381621

  • Result on the web

    <a href="http://link.springer.com/article/10.1007/s00894-012-1505-1" target="_blank" >http://link.springer.com/article/10.1007/s00894-012-1505-1</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1007/s00894-012-1505-1" target="_blank" >10.1007/s00894-012-1505-1</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Regulation of the transient receptor potential channel TRPA1 by its N-terminal ankyrin repeat domain

  • Original language description

    The transient receptor potential channel A1 (TRPA1) is unique among ion channels of higher vertebrates in that it harbors a large ankyrin repeat domain. The TRPA1 channel is expressed in the inner ear and in nociceptive neurons. It is involved in hearingas well as in the perception of pungent and irritant chemicals. The ankyrin repeat domain has special mechanical properties, which allows it to function as a soft spring that can be extended over a large range while maintaining structural integrity. A calcium-binding site has been experimentally identified within the ankyrin repeats. We built a model of the N-terminal 17 ankyrin repeat structure, including the calcium-binding EF-hand. In our simulations we find the calcium-bound state to be rigid as compared to the calcium-free state. While the end-to-end distance can change by almost 50% in the apo form, these fluctuations are strongly reduced by calcium binding. This increase in stiffness that constraints the end-to-end distance in t

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

  • CEP classification

    EI - Biotechnology and bionics

  • OECD FORD branch

Result continuities

  • Project

    Result was created during the realization of more than one project. More information in the Projects tab.

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)<br>S - Specificky vyzkum na vysokych skolach

Others

  • Publication year

    2012

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Journal of Molecular Modeling

  • ISSN

    1610-2940

  • e-ISSN

  • Volume of the periodical

    19

  • Issue of the periodical within the volume

    11

  • Country of publishing house

    US - UNITED STATES

  • Number of pages

    12

  • Pages from-to

    4689-4700

  • UT code for WoS article

    000326193200009

  • EID of the result in the Scopus database