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Molecular characterization and complete genome of a novel nepovirus from red clover

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F18%3A00492173" target="_blank" >RIV/60077344:_____/18:00492173 - isvavai.cz</a>

  • Result on the web

    <a href="http://dx.doi.org/10.1007/s00705-018-3742-9" target="_blank" >http://dx.doi.org/10.1007/s00705-018-3742-9</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1007/s00705-018-3742-9" target="_blank" >10.1007/s00705-018-3742-9</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Molecular characterization and complete genome of a novel nepovirus from red clover

  • Original language description

    During high throughput sequencing (HTS) of leaves from a symptomatic red clover plant, a new RNA virus, tentatively named red clover nepovirus A (RCNVA), was discovered. The complete genomic sequence was determined and characterized. Particularly noteworthy was that RCNVA shares high sequence identities in RNA1 with a group of phylogenetically related nepoviruses while homologies in the RNA2 segments are markedly lower. Based on the genomic organization and phylogenetic attributes, RCNVA should be classified as a novel virus of the genus Nepovirus (subfamily Comovirinae, family Secoviridae, order Picornavirales).

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database

  • CEP classification

  • OECD FORD branch

    10607 - Virology

Result continuities

  • Project

    <a href="/en/project/LD15035" target="_blank" >LD15035: Implementation of NGS in plant virology – unprecedented capacity with a risk of data overflow.</a><br>

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Others

  • Publication year

    2018

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Archives of Virology

  • ISSN

    0304-8608

  • e-ISSN

  • Volume of the periodical

    163

  • Issue of the periodical within the volume

    5

  • Country of publishing house

    AT - AUSTRIA

  • Number of pages

    3

  • Pages from-to

    1387-1389

  • UT code for WoS article

    000429328300034

  • EID of the result in the Scopus database

    2-s2.0-85045022701