Evolutionary forces at work in partitiviruses
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60077344%3A_____%2F19%3A00511205" target="_blank" >RIV/60077344:_____/19:00511205 - isvavai.cz</a>
Result on the web
<a href="https://link.springer.com/article/10.1007%2Fs11262-019-01680-0" target="_blank" >https://link.springer.com/article/10.1007%2Fs11262-019-01680-0</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1007/s11262-019-01680-0" target="_blank" >10.1007/s11262-019-01680-0</a>
Alternative languages
Result language
angličtina
Original language name
Evolutionary forces at work in partitiviruses
Original language description
The family Partitiviridae consists of dsRNA viruses with genome separated into two segments and encoding replicase and capsid protein only. We examined the nucleotide diversity expressed as the ratio d(N)/d(S) of nonsynonymous and synonymous substitutions, which has been calculated for 12 representative viruses of all five genera of partitiviruses. We can state that strong purifying selection works on both the RdRp and CP genes and propose that putative positive selection occurs also on the RdRp genes in two viruses. Among the 95 evaluated viruses, wherein both segments had been sequenced, 8 viruses in betapartitiviruses and 9 in alphapartitiviruses were identified as reassortment candidates because they differ extremely in their CP identity even as they are related in terms of RdRp. Furthermore, there are indications that reassortants are present among isolates of different viruses.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10607 - Virology
Result continuities
Project
<a href="/en/project/EF16_027%2F0008357" target="_blank" >EF16_027/0008357: International Mobilities of Researchers of the Biology Centre</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2019
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Virus Genes
ISSN
0920-8569
e-ISSN
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Volume of the periodical
55
Issue of the periodical within the volume
5
Country of publishing house
US - UNITED STATES
Number of pages
11
Pages from-to
563-573
UT code for WoS article
000486222300001
EID of the result in the Scopus database
2-s2.0-85067894327