Identification of selection signals on the X-Chromosome in East Adriatic Sheep: A new complementary approach

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60460709%3A41210%2F22%3A91147" target="_blank" >RIV/60460709:41210/22:91147 - isvavai.cz</a>
Result on the web
<a href="https://www.frontiersin.org/articles/10.3389/fgene.2022.887582/full" target="_blank" >https://www.frontiersin.org/articles/10.3389/fgene.2022.887582/full</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.3389/fgene.2022.887582" target="_blank" >10.3389/fgene.2022.887582</a>

Result language
angličtina
Original language name
Identification of selection signals on the X-Chromosome in East Adriatic Sheep: A new complementary approach
Original language description
Sheep are one of the most important livestock species in Croatia, found mainly in the Mediterranean coastal and mountainous regions along the East Adriatic coast, well adapted to the environment and mostly kept extensively. Our main objective was therefore to map the positive selection of the X-chromosome (18,983 SNPs that passed quality control), since nothing is known about the adaptation genes on this chromosome for any of the breeds from the Balkan cluster. Analyses were performed on a sample of eight native Croatian breeds (101 females and 100 males) representing the East Adriatic metapopulation and on 10 mouflons (five females and males), all sampled in Croatia. Three classical within-population approaches (extreme Runs of Homozygosity islands, integrated Haplotype Score, and number of Segregating Sites by Length) were applied along with our new approach called Haplotype Richness Drop (HRiD), which uses only the information contained in male haplotypes. We have also shown that phylogenetic anal
Czech name
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Czech description
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Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
40201 - Animal and dairy science; (Animal biotechnology to be 4.4)

Project
<a href="/en/project/QK1910156" target="_blank" >QK1910156: New approaches for the preservation of endangered livestock populations</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year
2022
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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