IRAP VARIABILITY IN Prunus domestica (L.) Borkh BASED ON Cassandra RETROTRANSPOSON POLYMORPHISM
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60460709%3A41340%2F17%3A75282" target="_blank" >RIV/60460709:41340/17:75282 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.2298/GENSR1703989S" target="_blank" >http://dx.doi.org/10.2298/GENSR1703989S</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.2298/GENSR1703989S" target="_blank" >10.2298/GENSR1703989S</a>
Alternative languages
Result language
angličtina
Original language name
IRAP VARIABILITY IN Prunus domestica (L.) Borkh BASED ON Cassandra RETROTRANSPOSON POLYMORPHISM
Original language description
Plum species are reported to possess a wide genomic variability and that is why DNA markers are still actual in the characterization of its germlasm. In this study, twenty-three genotypes of European plums were assessed for the amplified length based polymorphism among the retrotransposon Cassandra insertions in their genomes. The obtained insertional polymorphism caused by the activity of Cassandra showed regional and pedigree differences in the analysed accessions of European plums. Two primers were used in analysis. The first resulted in the amplification in 203 amplicons and the 86,6 % polymorphism. Two unique fragments were obtained for the Torysa and Podolínec varieties using this primer. The second primer resulted in the amplification in 267 amplicons and 74,2 % polymorphism. Four unique fragments were obtained for the plum varieties Švestka domácí, Čačanská ranná and Elena. Hierarchical cluster analysis divided the analysed accessions into the four main clusters. To show the length polymorphi
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
40106 - Agronomy, plant breeding and plant protection; (Agricultural biotechnology to be 4.4)
Result continuities
Project
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Continuities
S - Specificky vyzkum na vysokych skolach
Others
Publication year
2017
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
GENETIKA-BELGRADE
ISSN
0534-0012
e-ISSN
1820-6069
Volume of the periodical
49
Issue of the periodical within the volume
3
Country of publishing house
CZ - CZECH REPUBLIC
Number of pages
12
Pages from-to
989-1000
UT code for WoS article
000423604800019
EID of the result in the Scopus database
2-s2.0-85042104020