Modelling Nucleic Acid Structure and Flexibility: From Atomic to Mesoscopic Scale

Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388963%3A_____%2F12%3A00378718" target="_blank" >RIV/61388963:_____/12:00378718 - isvavai.cz</a>
Result on the web
<a href="http://pubs.rsc.org/en/content/chapter/bk9781849734622-00001/978-1-84973-462-2" target="_blank" >http://pubs.rsc.org/en/content/chapter/bk9781849734622-00001/978-1-84973-462-2</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1039/9781849735056-00001" target="_blank" >10.1039/9781849735056-00001</a>

Result language
angličtina
Original language name
Modelling Nucleic Acid Structure and Flexibility: From Atomic to Mesoscopic Scale
Original language description
The chapter is concerned with recent developments in the field of coarse-grained and multiscale modelling of DNA. Pseudoatom models at different scales are reviewed and critically compared. The main part is devoted to rigid base and basepair models of DNA shape and harmonic stiffness. The choice of model coordinates, inferring model parameters from unrestrained atomic-resolution molecular dynamics simulations, and the problem of locality are treated in detail. An original simulation of DNA A-tract is analyzed as an example. Anharmonic effects and alternative approaches are also discussed.
Czech name
—
Czech description
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Project
<a href="/en/project/LC512" target="_blank" >LC512: Center for biomolecules and complex molecular systems</a><br>
Continuities
Z - Vyzkumny zamer (s odkazem do CEZ)

Publication year
2012
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

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