CycloBranch 2.0
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F19%3A00517773" target="_blank" >RIV/61388971:_____/19:00517773 - isvavai.cz</a>
Result on the web
<a href="https://ms.biomed.cas.cz/cyclobranch/" target="_blank" >https://ms.biomed.cas.cz/cyclobranch/</a>
DOI - Digital Object Identifier
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Alternative languages
Result language
angličtina
Original language name
CycloBranch 2.0
Original language description
CycloBranch 2.0 is an open-source and cross-platform tool for identification of small molecules from mass spectra implemented in C++. A list of new features include: (1) prediction of elemental compositions of unknown compounds in liquid chromatography/mass spectrometry datasets and imaging mass spectra: (2) improved analysis of fragmentation patterns of (non)ribosomal peptides, polyketides and siderophores: (3) analysis of fragmentation patterns of metabolites with non-peptidic structure: (4) processing and visualization of profile mass spectra: (5) analysis of isotopic structures in product ion mass spectra: (6) analysis of fine isotopic structures of compounds containing metals: (7) fusion of mass spectrometry imaging datasets in imzML file format with optical, histology, and microscopy images: (8) visualization of chromatograms: (9) improved support of vendors’ file formats: and (10) many performance improvements, bug fixes, and other minor changes.
Czech name
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Czech description
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Classification
Type
R - Software
CEP classification
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OECD FORD branch
10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)
Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2019
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Internal product ID
CycloBranch 2.0
Technical parameters
91 MB
Economical parameters
Automatizace a zvýšení rychlosti zpracování hmotnostních spekter
Owner IČO
61388971
Owner name
Mikrobiologický ústav AV ČR, v. v. i.