Feeding on fungi: genomic and proteomic analysis of the enzymatic machinery of bacteria decomposing fungal biomass
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F20%3A00535741" target="_blank" >RIV/61388971:_____/20:00535741 - isvavai.cz</a>
Result on the web
<a href="https://sfamjournals.onlinelibrary.wiley.com/doi/abs/10.1111/1462-2920.15183" target="_blank" >https://sfamjournals.onlinelibrary.wiley.com/doi/abs/10.1111/1462-2920.15183</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1111/1462-2920.15183" target="_blank" >10.1111/1462-2920.15183</a>
Alternative languages
Result language
angličtina
Original language name
Feeding on fungi: genomic and proteomic analysis of the enzymatic machinery of bacteria decomposing fungal biomass
Original language description
Dead fungal biomass is an abundant source of nutrition in both litter and soil of temperate forests largely decomposed by bacteria. Here, we have examined the utilization of dead fungal biomass by the five dominant bacteria isolated from thein situdecomposition of fungal mycelia using a multiOMIC approach. The genomes of the isolates encoded a broad suite of carbohydrate-active enzymes, peptidases and transporters. In the extracellular proteome, onlyEwingella americanaexpressed chitinases while the twoPseudomonasisolates attacked chitin by lytic chitin monooxygenase, deacetylation and deamination.Variovoraxsp. expressed enzymes acting on the side-chains of various glucans and the chitin backbone. Surprisingly, despite its genomic potential,Pedobactersp. did not produce extracellular proteins to decompose fungal mycelia but presumably feeds on simple substrates. The ecological roles of the five individual strains exhibited complementary features for a fast and efficient decomposition of dead fungal biomass by the entire bacterial community.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10606 - Microbiology
Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2020
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Environmental Microbiology
ISSN
1462-2912
e-ISSN
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Volume of the periodical
22
Issue of the periodical within the volume
11
Country of publishing house
US - UNITED STATES
Number of pages
16
Pages from-to
4604-4619
UT code for WoS article
000564015400001
EID of the result in the Scopus database
2-s2.0-85089996565