Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F23%3A00574682" target="_blank" >RIV/61388971:_____/23:00574682 - isvavai.cz</a>
Alternative codes found
RIV/60162694:G33__/23:N0000013 RIV/60461373:22310/23:43927159 RIV/60461373:22330/23:43927159
Result on the web
<a href="https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005678" target="_blank" >https://www.microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.005678</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1099/ijsem.0.005678" target="_blank" >10.1099/ijsem.0.005678</a>
Alternative languages
Result language
angličtina
Original language name
Solicola gregarius gen. nov., sp. nov., a soil actinobacterium isolated after enhanced cultivation with Micrococcus luteus culture supernatant
Original language description
An actinobacterial strain, designated A5X3R13(T), was isolated from a compost soil suspension supplemented with extracellular material from a Micrococcus luteus-culture supernatant. The strain was cultured on tenfold-diluted reasoner's 2A agar. The cells were ovoid-to-rod shaped, non-motile, Gram-stain-positive, oxidase-negative, catalase-positive and had a width of 0.5 mu m and a length of 0.8-1.2 mu m. The results of both 16S rRNA-based phylogenetic and whole-genome analyses indicate that A5X3R13(T) forms a distinct lineage within the family Nocardioidaceae (order Propionibacteriales). On the basis of the 16S rRNA gene sequence, A5X3R13(T) was closely related to Aeromicrobium terrae CC-CFT486T (96.2%), Nocardioides iriomotensis IR27-S3(T) (96.2%), Nocardioides guangzhouensis 130(T) (95.6%), Marmoricola caldifontis YIM 730233T (95.5 %), Aeromicrobium alkaliterrae KSL-107(T) (95.4%), Aeromicrobium choanae 9H-4T (95.4%), Aeromicrobium panaciterrae Gsoil 161(T) (95.3 %), and Nocardioides jensenii NBRC 14755(T) (95.2 %). The genome had a length of 4915 757 bp, and its DNA G+C content was 68.5 mol %. The main fatty acids were 10-methyl C-17:0, C-16:0, C-15:0, C-18:0, C-17:0 and iso-C-16:0. The main polar lipids were phosphatidylglycerol, diphosphatidylglycerol, phosphatidylinositol and two unidentified phospholipids. MK-9(H 4) was the predominant respiratory quinone. The peptidoglycan type was A3 gamma (A41.1) and contained alanine, glycine, glutamic acid and ll-diaminopimelic acid in a molar ratio of 1.2 :0.9:1.0:0.8. On the basis of the results of the phylogenetic and phenotypic analyses and comparisons with other members of the family Nocardioidaceae, strain A5X3R13(T) is proposed to represent a novel species within a novel genus, for which the name Solicola gregarius gen. nov., sp. nov. is proposed. The type strain is A5X3R13(T) (=DSM 112953(T)=NCCB 100840T).
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10606 - Microbiology
Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2023
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
International Journal of Systematic and Evolutionary Microbiology
ISSN
1466-5026
e-ISSN
1466-5034
Volume of the periodical
73
Issue of the periodical within the volume
1
Country of publishing house
GB - UNITED KINGDOM
Number of pages
8
Pages from-to
005678
UT code for WoS article
001008263300027
EID of the result in the Scopus database
2-s2.0-85146775471