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Bringing nitrilase sequences from databases to life: the search for novel substrate specificities with a focus on dinitriles

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61389013%3A_____%2F16%3A00461367" target="_blank" >RIV/61389013:_____/16:00461367 - isvavai.cz</a>

  • Alternative codes found

    RIV/61388971:_____/16:00460036 RIV/00216208:11310/16:10334550

  • Result on the web

    <a href="http://dx.doi.org/10.1007/s00253-015-7023-1" target="_blank" >http://dx.doi.org/10.1007/s00253-015-7023-1</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1007/s00253-015-7023-1" target="_blank" >10.1007/s00253-015-7023-1</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Bringing nitrilase sequences from databases to life: the search for novel substrate specificities with a focus on dinitriles

  • Original language description

    The aim of this study was to discover new nitrilases with useful activities, especially towards dinitriles that are precursors of high-value cyano acids. Genes coding for putative nitrilases of different origins (fungal, plant, or bacterial) with moderate similarities to known nitrilases were selected by mining the GenBank database, synthesized artificially and expressed in Escherichia coli. The enzymes were purified, examined for their substrate specificities, and classified into subtypes (aromatic nitrilase, arylacetonitrilase, aliphatic nitrilase, cyanide hydratase) which were largely in accordance with those predicted from bioinformatic analysis. The catalytic potential of the nitrilases for dinitriles was examined with cyanophenyl acetonitriles, phenylenediacetonitriles, and fumaronitrile. The nitrilase activities and selectivities for dinitriles and the reaction products (cyano acid, cyano amide, diacid) depended on the enzyme subtype. At a preparative scale, all the examined dinitriles were hydrolyzed into cyano acids and fumaronitrile was converted to cyano amide using E. coli cells producing arylacetonitrilases and an aromatic nitrilase, respectively.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

  • CEP classification

    CD - Macromolecular chemistry

  • OECD FORD branch

Result continuities

  • Project

    Result was created during the realization of more than one project. More information in the Projects tab.

  • Continuities

    I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2016

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Applied Microbiology and Biotechnology

  • ISSN

    0175-7598

  • e-ISSN

  • Volume of the periodical

    100

  • Issue of the periodical within the volume

    5

  • Country of publishing house

    DE - GERMANY

  • Number of pages

    10

  • Pages from-to

    2193-2202

  • UT code for WoS article

    000371243500015

  • EID of the result in the Scopus database

    2-s2.0-84958893244