Distribution of apple and blackcurrant microbiota in Lithuania and the Czech Republic
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61988987%3A17310%2F18%3AA1901WF7" target="_blank" >RIV/61988987:17310/18:A1901WF7 - isvavai.cz</a>
Alternative codes found
RIV/60077344:_____/18:00498841
Result on the web
<a href="http://dx.doi.org/10.1016/j.micres.2017.09.004" target="_blank" >http://dx.doi.org/10.1016/j.micres.2017.09.004</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1016/j.micres.2017.09.004" target="_blank" >10.1016/j.micres.2017.09.004</a>
Alternative languages
Result language
angličtina
Original language name
Distribution of apple and blackcurrant microbiota in Lithuania and the Czech Republic
Original language description
The microbial assemblies on the surface of plants correlate with specific climatic features, suggesting a direct link between environmental conditions and microbial inhabitation patterns. At the same time however, microbial communities demonstrate distinct profiles depending on the plant species and region of origin. In this study, we report Next Generation Sequencing-based metagenomic analysis of microbial communities associated with apple and blackcurrant fruits harvested from Lithuania and the Czech Republic. Differences in the taxonomic composition of eukaryotic and prokaryotic microorganisms were observed between plant types. Our results revealed limited geographic differentiation between the bacterial and fungal communities associated with apples. In contrast, blackcurrant berries harvested from different regions demonstrated high diversity in both bacterial and fungal microbiota structures. Among fungal and bacterial microorganisms, we identified both potentially beneficial (Cryptococcus, Hanseniaspora, Massilia, Rhodotorula, Sphingomonas) and phytopathogenic microorganisms (Cladosporium, Pantoea, Phoma, Pseudomonas, Septoria, Taphrina) indicating their important roles in ecological and evolutionary processes.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10606 - Microbiology
Result continuities
Project
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Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2018
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
MICROBIOLOGICAL RESEARCH
ISSN
0944-5013
e-ISSN
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Volume of the periodical
206
Issue of the periodical within the volume
leden
Country of publishing house
DE - GERMANY
Number of pages
8
Pages from-to
1-8
UT code for WoS article
000423013700001
EID of the result in the Scopus database
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