OverProt: secondary structure consensus for protein families
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61989592%3A15310%2F22%3A73614001" target="_blank" >RIV/61989592:15310/22:73614001 - isvavai.cz</a>
Alternative codes found
RIV/00216224:14310/22:00127334
Result on the web
<a href="https://academic.oup.com/bioinformatics/article/38/14/3648/6604272" target="_blank" >https://academic.oup.com/bioinformatics/article/38/14/3648/6604272</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1093/bioinformatics/btac384" target="_blank" >10.1093/bioinformatics/btac384</a>
Alternative languages
Result language
angličtina
Original language name
OverProt: secondary structure consensus for protein families
Original language description
Every protein family has a set of characteristic secondary structures. However, due to individual variations, a single structure is not enough to represent the whole family. OverProt can create a secondary structure consensus, showing the general fold of the family as well as its variation. Our server provides precomputed results for all CATH superfamilies and user-defined computations, visualized by an interactive viewer, which shows the secondary structure element type, length, frequency of occurrence, spatial variability and β-connectivity. Availability and implementation OverProt Server is freely available at https://overprot.ncbr.muni.cz.
Czech name
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Czech description
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Classification
Type
J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database
CEP classification
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OECD FORD branch
10602 - Biology (theoretical, mathematical, thermal, cryobiology, biological rhythm), Evolutionary biology
Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2022
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
BIOINFORMATICS
ISSN
1367-4803
e-ISSN
1460-2059
Volume of the periodical
38
Issue of the periodical within the volume
14
Country of publishing house
GB - UNITED KINGDOM
Number of pages
3
Pages from-to
3648-3650
UT code for WoS article
000812249100001
EID of the result in the Scopus database
2-s2.0-85134911267