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Genetic diversity in the genetic resource of Old Kladruber Horse using microsatellite DNA markers

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F62156489%3A43210%2F07%3A00121241" target="_blank" >RIV/62156489:43210/07:00121241 - isvavai.cz</a>

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    Genetic diversity in the genetic resource of Old Kladruber Horse using microsatellite DNA markers

  • Original language description

    The Old Kladruber horse is the most important genetic resource in the Czech Republic. Seventeen microsatellites were genotyped in this breed using a panel of microsatellites recommended for routine parentage testing by the ISAG Equine Genetics Standing Committee. The analysis of all loci in the population (n=153) revealed 105 alleles. The mean number of alleles per locus was 6.18, ranging from 4 (HTG7) to 10 (ASB17). Allele frequencies for the most frequently allele were as follows: AHT4 (H=0.37), HMS7(O=0.31), HTG4 (M=0.27), VHL20 (Q=0.38), AHT5 (N=0.47), ASB2 (M=0.35), ASB23 (J=0.30), HMS6 (L=0.47), HTG6 (O=0.59), ASB17 (R=0.44), CA425 (N=0.58), HMS1 (M=0.60), LEX3 (L=0.61), HMS2 (K=0.46), HMS3 (P=0.45), HTG10 (O=0.48), HTG7 (O=0.87). The highest heterozygosity (above 70%) was observed for HTG4 (78.47), ASB2 (77.95), VHL20 (77.77), ASB23 (77.05), HMS7 (76.93) and AHT4 (71.68). The lowest heterozygosity (below 50%) was found for HTG7 (22.47). The value of inbreeding coefficient was z

  • Czech name

    Genetická diverzita u starokladrubských koní s využitím mikrosatelitních DNA markerů

  • Czech description

    Panel 17 mikrosatelitních DNA markerů byl využit pro stanovení genetické diverzity populace starokladrubských koní v České Republice. Analyzováno bylo 153 zvířat.

Classification

  • Type

    O - Miscellaneous

  • CEP classification

    EB - Genetics and molecular biology

  • OECD FORD branch

Result continuities

  • Project

    <a href="/en/project/1G58073" target="_blank" >1G58073: The research and pilot validation of genomic methods applicable to the selection of quality and commercial utilisation of farm animals and their products.</a><br>

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Others

  • Publication year

    2007

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů