Survey and diversity of grapevine pinot gris virus in algeria and comprehensive high-throughput small rna sequencing analysis of two isolates from vitis vinifera cv. Sabel revealing high viral diversity

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F62156489%3A43510%2F20%3A43918378" target="_blank" >RIV/62156489:43510/20:43918378 - isvavai.cz</a>

Result on the web

<a href="https://doi.org/10.3390/genes11091110" target="_blank" >https://doi.org/10.3390/genes11091110</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.3390/genes11091110" target="_blank" >10.3390/genes11091110</a>

Result language

angličtina

Original language name

Survey and diversity of grapevine pinot gris virus in algeria and comprehensive high-throughput small rna sequencing analysis of two isolates from vitis vinifera cv. Sabel revealing high viral diversity

Original language description

Grapevine Pinot gris virus (GPGV) is a putative causal agent of grapevine leaf mottling and deformation disease that has been reported worldwide throughout the grapevine-growing regions. Fifty-four grapevines collected from five Algerian grapevine-growing regions were tested for the presence of GPGV in phloem tissues. Eight of the tested grapevines were infected by GPGV. Viromes of two selected Vitis vinifera cv. Sabel grapevines infected by GPGV and showing virus-like symptoms were analyzed by small RNA sequencing. Phylogenetic analyses of the partial coding sequence (cds) of the RNA-dependent RNA polymerase (RdRp) domain showed that all Algerian GPGV isolates were grouped with some already-described asymptomatic isolates. This study provides the first survey of the occurrence of GPGV in Algeria. Moreover, Grapevine fleck virus, Grapevine rupestris stem pitting-associated virus, Grapevine virus B, Grapevine rupestris vein feathering virus, Hop stunt viroid and Grapevine yellow speckle viroid 1 were detected in Algeria for the first time.

Czech name

—

Czech description

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Type

J_imp - Article in a specialist periodical, which is included in the Web of Science database

CEP classification

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OECD FORD branch

40105 - Horticulture, viticulture

Project

Result was created during the realization of more than one project. More information in the Projects tab.

Continuities

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Publication year

2020

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Genes

ISSN

2073-4425

e-ISSN

—

Volume of the periodical

11

Issue of the periodical within the volume

9

Country of publishing house

CH - SWITZERLAND

Number of pages

12

Pages from-to

1110

UT code for WoS article

000579980500001

EID of the result in the Scopus database

2-s2.0-85091254572