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Treept: a program for permutation testing of concordance between phylogeny and the distribution of phenetic traits, ported to Plan 9 OS

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F67985831%3A_____%2F08%3A00322669" target="_blank" >RIV/67985831:_____/08:00322669 - isvavai.cz</a>

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    Treept: a program for permutation testing of concordance between phylogeny and the distribution of phenetic traits, ported to Plan 9 OS

  • Original language description

    Treept is the freeware program for permutation testing concordance between phylogeny and the distribution of phenetic traits. Source code of treept is available. The program can analyse the quantitive and qualitative character data as well as the distance matrices. The phylogenic tree can be entered in usual bracketed format. The average distance between sister OTUs is calculated or read from a distance matrix and used as a measure of concordance which is tested in one-sided or two sided permutation tail test. The program can either generate all possible permutations of apical branches of the tree or the number of random permutation of tree to be generated can be choosen by a researcher. Plan 9 is a distributed operating system developed by researchersat Bell Labs (Lucent) to replace UNIX OS.

  • Czech name

    Treept: program pro permutační testy konkordance mezi fylogenetickým stromem a fenetickými znaky, pro operační systém Plan 9

  • Czech description

    Treept je freeware program pro permutační testy konkordance mezi fylogenetickým stromem a fenetickými znaky organismů, vyvinutý pro potřeby fylogenetiky a evoluční biologie. Nyní byl přenesen pod operační systém Plan 9.

Classification

  • Type

    R - Software

  • CEP classification

    DB - Geology and mineralogy

  • OECD FORD branch

Result continuities

  • Project

    <a href="/en/project/IAA300130702" target="_blank" >IAA300130702: Growth rhythms as an indicator of the Earths rotation and climate changes in the geological past.</a><br>

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)

Others

  • Publication year

    2008

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Internal product ID

    ARL 0322669

  • Technical parameters

    1.812658 MB

  • Economical parameters

  • Owner IČO

    00216208

  • Owner name

    Přírodovědecká fakulta UK Praha