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Refinement of the AMBER force field for nucleic acids: Improving the description of alpha/gamma conformers

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F68081707%3A_____%2F07%3A00081991" target="_blank" >RIV/68081707:_____/07:00081991 - isvavai.cz</a>

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    Refinement of the AMBER force field for nucleic acids: Improving the description of alpha/gamma conformers

  • Original language description

    We present here the parmbsc0 force field, a refinement of the AMBER parm99 force field, where emphasis has been made on the correct representation of the alpha/gamma concerted rotation in nucleic acids.

  • Czech name

    Propracování silového pole AMBER pro nukleové kyseliny: Zlepšený popis alfa/gamma konformerů

  • Czech description

    Zde prezentujeme silové pole parmbsc0 (propracované silové pole AMBER parm99), s důrazem kladeným na správnou reprezentaci alfa/gamma spřažené rotace v nukleových kyselinách.

Classification

  • Type

    J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

  • CEP classification

    BO - Biophysics

  • OECD FORD branch

Result continuities

  • Project

    Result was created during the realization of more than one project. More information in the Projects tab.

  • Continuities

    Z - Vyzkumny zamer (s odkazem do CEZ)

Others

  • Publication year

    2007

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Biophysical Journal

  • ISSN

    0006-3495

  • e-ISSN

  • Volume of the periodical

    92

  • Issue of the periodical within the volume

    11

  • Country of publishing house

    US - UNITED STATES

  • Number of pages

    13

  • Pages from-to

    3817-3829

  • UT code for WoS article

  • EID of the result in the Scopus database