Characterization of 151 SNPs for population structure analysis of the endangered Tatra chamois (Rupicapra rupicapra tatrica) and its relative, the Alpine chamois (R. r. rupicapra)
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F68081766%3A_____%2F11%3A00351529" target="_blank" >RIV/68081766:_____/11:00351529 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.1016/j.mambio.2010.10.004" target="_blank" >http://dx.doi.org/10.1016/j.mambio.2010.10.004</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1016/j.mambio.2010.10.004" target="_blank" >10.1016/j.mambio.2010.10.004</a>
Alternative languages
Result language
angličtina
Original language name
Characterization of 151 SNPs for population structure analysis of the endangered Tatra chamois (Rupicapra rupicapra tatrica) and its relative, the Alpine chamois (R. r. rupicapra)
Original language description
We present 151 SNPs (single nucleotide polymorphisms) identified in Tatra and Alpine chamois individuals after genotyping with the Bovine SNP50 Genotyping BeadChip (Illumina). Population structure analysis based on the identified 151 SNPs as well as a subset of 48 SNPs were able to give information about geographic origin of each individual making the markers suitable for future evaluation and monitoring of the genetic status of the Tatra and Alpine chamois. Our study demonstrates how it is possible toquickly identify informative SNPs in non-model organisms based on a SNP marker panel created for a related domestic species.
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
EG - Zoology
OECD FORD branch
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Result continuities
Project
<a href="/en/project/IAA600930609" target="_blank" >IAA600930609: Genetic structure of chamois populations in Central Europe</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)
Others
Publication year
2011
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Mammalian Biology
ISSN
1616-5047
e-ISSN
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Volume of the periodical
76
Issue of the periodical within the volume
5
Country of publishing house
DE - GERMANY
Number of pages
2
Pages from-to
644-645
UT code for WoS article
000295440100017
EID of the result in the Scopus database
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