Oligotyping reveals differences between gut microbiomes of free-ranging sympatric Namibian carnivores (Acinonyx jubatus, Canis mesomelas) on a bacterial species-like level

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F68081766%3A_____%2F14%3A00433835" target="_blank" >RIV/68081766:_____/14:00433835 - isvavai.cz</a>

Result on the web

<a href="http://dx.doi.org/10.3389/fmicb.2014.00526" target="_blank" >http://dx.doi.org/10.3389/fmicb.2014.00526</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.3389/fmicb.2014.00526" target="_blank" >10.3389/fmicb.2014.00526</a>

Result language

angličtina

Original language name

Oligotyping reveals differences between gut microbiomes of free-ranging sympatric Namibian carnivores (Acinonyx jubatus, Canis mesomelas) on a bacterial species-like level

Original language description

Recent gut microbiome studies in model organisms emphasize the effects of intrinsic and extrinsic factors on the variation of the bacterial composition and its impact on the overall health status of the host. Species occurring in the same habitat might share a similar microbiome, especially if they overlap in ecological and behavioral traits. So far, the natural variation in microbiomes of free-ranging wildlife species has not been thoroughly investigated. The few existing studies exploring microbiomesthrough 16S rRNA gene reads clustered sequencing reads into operational taxonomic units (OTUs) based on a similarity threshold (e.g., 97%). This approach, in combination with the low resolution of target databases, generally limits the level of taxonomicassignments to the genus level. However, distinguishing natural variation of microbiomes in healthy individuals from ?abnormal microbial compositions that affect host health requires knowledge of the ?normal microbial flora at a high tax

Czech name

—

Czech description

—

Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

EG - Zoology

OECD FORD branch

—

Project

<a href="/en/project/EE2.3.20.0303" target="_blank" >EE2.3.20.0303: Next-generation technologies in evolutionary genetics</a><br>

Continuities

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year

2014

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

Frontiers in Microbiology

ISSN

1664-302X

e-ISSN

—

Volume of the periodical

5

Issue of the periodical within the volume

526

Country of publishing house

CH - SWITZERLAND

Number of pages

12

Pages from-to

—

UT code for WoS article

000343590000001

EID of the result in the Scopus database

—