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Bioinformatics and Computational Biology

Public support

  • Provider

    Ministry of Education, Youth and Sports

  • Programme

  • Call for proposals

  • Main participants

    Univerzita Palackého v Olomouci / Lékařská fakulta

  • Contest type

    OP - EU Operational Programme

  • Contract ID

    16_017/0002359-01

Alternative language

  • Project name in Czech

    Bioinformatika a výpočetní biologie

  • Annotation in Czech

    Cílem projektu je zkvalitnění infrastruktury (modernizace) pro výzkumně vzdělávací účely, a to jak pro nový výzkumně zaměřený doktorský studijní program Bioinformatika a výpočetní biologie vytvořený v rámci výzvy Rozvoj výzkumně zaměřených studijních programů, tak pro stávající doktorské programy akreditované na Lékařské fakultě UP a Fakultě elektrotechniky a informatiky VŠB-TUO. Vybudovaná infrastruktura bude mít špičkové parametry odpovídající aktuálnímu stavu poznání v biologii, biomedicíně a informatice a významně posílí úroveň znalostí a kompetence studentů doktorských programů i pregraduálních studentů. Studenti se díky ní seznámí prakticky od zpracování materiálu, získávání dat až po analýzu dat v interdisciplinárním týmu odborníků z více domén na pracovištích s vysokou mírou excelence. Projekt reflektuje potřeby trhu práce na odborníky v oblasti informatiky, bioinformatiky a výpočetní biologie a biomedicíny. Projekt je plně v souladu s národní i regionálními RIS3 strategiemi a strategiemi obou vysokých škol a umožní rozvoj bioinformatiky v České republice. Soulad cílů projektu s RIS3 strategií je detailně popsán v příloze projektu.

Scientific branches

  • R&D category

    IF - RDI infrastructure

  • CEP classification - main branch

    EI - Biotechnology and bionics

  • CEP - secondary branch

    EB - Genetics and molecular biology

  • CEP - another secondary branch

    IN - Informatics

  • OECD FORD - equivalent branches <br>(according to the <a href="http://www.vyzkum.cz/storage/att/E6EF7938F0E854BAE520AC119FB22E8D/Prevodnik_oboru_Frascati.pdf">converter</a>)

    10201 - Computer sciences, information science, bioinformathics (hardware development to be 2.2, social aspect to be 5.8)<br>10603 - Genetics and heredity (medical genetics to be 3)<br>10604 - Reproductive biology (medical aspects to be 3)<br>10605 - Developmental biology<br>10608 - Biochemistry and molecular biology<br>10609 - Biochemical research methods<br>20801 - Environmental biotechnology<br>20802 - Bioremediation, diagnostic biotechnologies (DNA chips and biosensing devices) in environmental management<br>20803 - Environmental biotechnology related ethics<br>20901 - Industrial biotechnology<br>20902 - Bioprocessing technologies (industrial processes relying on biological agents to drive the process) biocatalysis, fermentation<br>20903 - Bioproducts (products that are manufactured using biological material as feedstock) biomaterials, bioplastics, biofuels, bioderived bulk and fine chemicals, bio-derived novel materials<br>30101 - Human genetics<br>30401 - Health-related biotechnology<br>30402 - Technologies involving the manipulation of cells, tissues, organs or the whole organism (assisted reproduction)<br>30403 - Technologies involving identifying the functioning of DNA, proteins and enzymes and how they influence the onset of disease and maintenance of well-being (gene-based diagnostics and therapeutic interventions [pharmacogenomics, gene-based therapeutics])<br>30404 - Biomaterials (as related to medical implants, devices, sensors)<br>30405 - Medical biotechnology related ethics<br>40401 - Agricultural biotechnology and food biotechnology<br>40402 - GM technology (crops and livestock), livestock cloning, marker assisted selection, diagnostics (DNA chips and biosensing devices for the early/accurate detection of diseases) biomass feedstock production technologies, biopharming<br>40403 - Agricultural biotechnology related ethics

Completed project evaluation

  • Provider evaluation

    V - Vynikající výsledky projektu (s mezinárodním významem atd.)

  • Project results evaluation

    The project made it possible to secure the infrastructural and material background for the implementation of the new doctoral study program Bioinformatics and Computational Biology. There were made building modifications in the part of the Theoretical Institutes of the Faculty of Medicine and Dentistry of UP. There was also purchased the equipment of laboratory spaces and classrooms. In addition, key devices were provided to familiarize students with the most modern technologies in the field of genomics and proteomics. Pilot tests and sample analyzes were carried out on the devices with the aim of obtaining datasets for future students. Remote access to share and save data between the Faculty of Medicine of UP and the Olomouc Faculty Hospital was set up.

Solution timeline

  • Realization period - beginning

    May 1, 2017

  • Realization period - end

    Jun 30, 2023

  • Project status

    U - Finished project

  • Latest support payment

    Sep 6, 2020

Data delivery to CEP

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

  • Data delivery code

    CEP24-MSM-EF-U

  • Data delivery date

    Jul 1, 2024

Finance

  • Total approved costs

    51,127 thou. CZK

  • Public financial support

    5,114 thou. CZK

  • Other public sources

    2,556 thou. CZK

  • Non public and foreign sources

    0 thou. CZK