Global Features of Gene Expression on the Proteome and Transcriptome Levels in S-coelicolor during Germination

Result code in IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216208%3A11110%2F13%3A10190164" target="_blank" >RIV/00216208:11110/13:10190164 - isvavai.cz</a>

Alternative codes found

RIV/61388971:_____/13:00396048

Result on the web

<a href="http://dx.doi.org/10.1371/journal.pone.0072842" target="_blank" >http://dx.doi.org/10.1371/journal.pone.0072842</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1371/journal.pone.0072842" target="_blank" >10.1371/journal.pone.0072842</a>

Result language

angličtina

Original language name

Global Features of Gene Expression on the Proteome and Transcriptome Levels in S-coelicolor during Germination

Original language description

Streptomycetes have been studied mostly as producers of secondary metabolites, while the transition from dormant spores to an exponentially growing culture has largely been ignored. Here, we focus on a comparative analysis of fluorescently and radioactively labeled proteome and microarray acquired transcriptome expressed during the germination of Streptomyces coelicolor. The time-dynamics is considered, starting from dormant spores through 5.5 hours of growth with 13 time points. Time series of the geneexpressions were analyzed using correlation, principal components analysis and an analysis of coding genes utilization. Principal component analysis was used to identify principal kinetic trends in gene expression and the corresponding genes driving S.coelicolor germination. In contrast with the correlation analysis, global trends in the gene/protein expression reflected by the first principal components showed that the prominent patterns in both the protein and the mRNA domains are su

Czech name

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Czech description

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Type

J_x - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

CEP classification

EE - Microbiology, virology

OECD FORD branch

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Project

Result was created during the realization of more than one project. More information in the Projects tab.

Continuities

S - Specificky vyzkum na vysokych skolach<br>I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Publication year

2013

Confidentiality

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Name of the periodical

PLoS ONE

ISSN

1932-6203

e-ISSN

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Volume of the periodical

8

Issue of the periodical within the volume

9

Country of publishing house

US - UNITED STATES

Number of pages

14

Pages from-to

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UT code for WoS article

000326405300031

EID of the result in the Scopus database

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