MultiSETTER - Multiple RNA Structure Similarity Algorithm
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216208%3A11320%2F13%3A10139297" target="_blank" >RIV/00216208:11320/13:10139297 - isvavai.cz</a>
Result on the web
<a href="http://dx.doi.org/10.1007/978-3-319-02624-4_6" target="_blank" >http://dx.doi.org/10.1007/978-3-319-02624-4_6</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1007/978-3-319-02624-4_6" target="_blank" >10.1007/978-3-319-02624-4_6</a>
Alternative languages
Result language
angličtina
Original language name
MultiSETTER - Multiple RNA Structure Similarity Algorithm
Original language description
Recent advances in RNA research and a steady growth of available RNA structures call for bioinformatics methods for handling RNA structural data. Recently, we have introduced SETTER - a fast and accurate method for RNA pairwise structural alignment. In the present contribution we describe its extension for multiple RNA structure alignment called MultiSETTER. It combines SETTER's decomposition of RNA structures into disjoint fragments with a well known multiple sequence alignment algorithm ClustalW adapted for the structural alignment. We demonstrate the validity of our approach on the task of automatic classification of RNA structures.
Czech name
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Czech description
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Classification
Type
D - Article in proceedings
CEP classification
IN - Informatics
OECD FORD branch
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Result continuities
Project
<a href="/en/project/GAP202%2F11%2F0968" target="_blank" >GAP202/11/0968: Large-scale Nonmetric Similarity Search in Complex Domains</a><br>
Continuities
I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace
Others
Publication year
2013
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Article name in the collection
Advances in Bioinformatics and Computational Biology
ISBN
978-3-319-02623-7
ISSN
0302-9743
e-ISSN
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Number of pages
12
Pages from-to
59-70
Publisher name
Springer
Place of publication
Berlin
Event location
Recife
Event date
Nov 3, 2013
Type of event by nationality
WRD - Celosvětová akce
UT code for WoS article
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