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A flexible technique for the automatic design for approximate string matching architectures

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14330%2F06%3A00016791" target="_blank" >RIV/00216224:14330/06:00016791 - isvavai.cz</a>

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    A flexible technique for the automatic design for approximate string matching architectures

  • Original language description

    Systolic array architectures for approximate string matching play a significant role as hardware accelerators in biological applications. However, their wider use is limited by the lack of flexibility required by often variable tasks. In this respect, itis desirable to develop a procedure for automatic design and implementation of such accelerators to reach high performance and efficiency with as little human effort on the side of the designer as possible. This paper proposes the essential element of such procedure, a method for the calculation of generic systolic array parameters with respect to maximal performance and efficient resource utilization.

  • Czech name

    Flexibilní technika pro automatické navrhování architektur pro hledání podobnosti řetězců

  • Czech description

    V tomto článku navrhujeme metodu pro výpočet optimální konfigurace systolického pole pro použití v hardwarových akcelerátorech porovnávání řetězců v molekulárně-biologických aplikacích.

Classification

  • Type

    D - Article in proceedings

  • CEP classification

    JC - Computer hardware and software

  • OECD FORD branch

Result continuities

  • Project

  • Continuities

    S - Specificky vyzkum na vysokych skolach

Others

  • Publication year

    2006

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Article name in the collection

    Proceedings of 2006 IEEE Design and Diagnostics of Electronic Circuits and Systems Workshop

  • ISBN

    1424401844

  • ISSN

  • e-ISSN

  • Number of pages

    2

  • Pages from-to

    83-84

  • Publisher name

    IEEE Computer Society

  • Place of publication

    Praha

  • Event location

    Praha

  • Event date

    Jan 1, 2006

  • Type of event by nationality

    WRD - Celosvětová akce

  • UT code for WoS article