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Accurate Fitting SAXS Curves with NMR Structure Ensembles

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14610%2F15%3A00083645" target="_blank" >RIV/00216224:14610/15:00083645 - isvavai.cz</a>

  • Result on the web

    <a href="http://pos.sissa.it/archive/conferences/239/025/ISGC2015_025.pdf" target="_blank" >http://pos.sissa.it/archive/conferences/239/025/ISGC2015_025.pdf</a>

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    Accurate Fitting SAXS Curves with NMR Structure Ensembles

  • Original language description

    Typical NMR analyses of a biomolecule yields a set of up to few dozens candidate 3D structures of the analyzed molecule without any clues to discriminate among them further. A parallel SAXS experiment on the same sample can be used for this purpose. Previous implementations of ?ensemble fit? (search for a mix of molecular conformations which matches the SAXS curve) were designed to choose from a huge ensemble generated by molecular dynamics. Therefore the methods must trade off accuracy for manageable speed, and they end up in mixing curves computed with rather different values of parameters which have physical meaning, which should be avoided. On the contrary, with a relatively small input set of candidate NMR structures we take a more accurate approach.

  • Czech name

  • Czech description

Classification

  • Type

    D - Article in proceedings

  • CEP classification

    CE - Biochemistry

  • OECD FORD branch

Result continuities

  • Project

  • Continuities

    S - Specificky vyzkum na vysokych skolach

Others

  • Publication year

    2015

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Article name in the collection

    Proceedings of International Symposium on Grids and Clouds 2015

  • ISBN

  • ISSN

    1824-8039

  • e-ISSN

  • Number of pages

    9

  • Pages from-to

  • Publisher name

    Proceedings of Science

  • Place of publication

    Pissa

  • Event location

    Taipei

  • Event date

    Jan 1, 2015

  • Type of event by nationality

    WRD - Celosvětová akce

  • UT code for WoS article