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High-quality and universal empirical atomic charges for chemoinformatics applications

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00216224%3A14740%2F15%3A00081211" target="_blank" >RIV/00216224:14740/15:00081211 - isvavai.cz</a>

  • Result on the web

    <a href="http://jcheminf.springeropen.com/articles/10.1186/s13321-015-0107-1" target="_blank" >http://jcheminf.springeropen.com/articles/10.1186/s13321-015-0107-1</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1186/s13321-015-0107-1" target="_blank" >10.1186/s13321-015-0107-1</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    High-quality and universal empirical atomic charges for chemoinformatics applications

  • Original language description

    Background: Partial atomic charges describe the distribution of electron density in a molecule and therefore provide clues to the chemical behaviour of molecules. Recently, these charges have become popular in chemoinformatics, as they are informative descriptors that can be utilised in pharmacophore design, virtual screening, similarity searches etc. Especially conformationally-dependent charges perform very successfully. In particular, their fast and accurate calculation via the Electronegativity Equalization Method (EEM) seems very promising for chemoinformatics applications. Unfortunately, published EEM parameter sets include only parameters for basic atom types and they often miss parameters for halogens, phosphorus, sulphur, triple bonded carbonetc. Therefore their applicability for drug-like molecules is limited.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)

  • CEP classification

    CE - Biochemistry

  • OECD FORD branch

Result continuities

  • Project

    Result was created during the realization of more than one project. More information in the Projects tab.

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>S - Specificky vyzkum na vysokych skolach

Others

  • Publication year

    2015

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Journal of Cheminformatics

  • ISSN

    1758-2946

  • e-ISSN

  • Volume of the periodical

    7

  • Issue of the periodical within the volume

    DEC

  • Country of publishing house

    GB - UNITED KINGDOM

  • Number of pages

    10

  • Pages from-to

    1-10

  • UT code for WoS article

    000366278000001

  • EID of the result in the Scopus database