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Development, characterization and cross-amplification of 16 microsatellite primers for Atriplex tatarica (Amaranthaceae)

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F60460709%3A41330%2F17%3A75191" target="_blank" >RIV/60460709:41330/17:75191 - isvavai.cz</a>

  • Alternative codes found

    RIV/67985939:_____/17:00487739

  • Result on the web

    <a href="http://dx.doi.org/10.3732/apps.1700094" target="_blank" >http://dx.doi.org/10.3732/apps.1700094</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.3732/apps.1700094" target="_blank" >10.3732/apps.1700094</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Development, characterization and cross-amplification of 16 microsatellite primers for Atriplex tatarica (Amaranthaceae)

  • Original language description

    Microsatellite primers were developed to characterize the genetic diversity and structuring of the annual herb Atriplex tatarica (Amaranthaceae) and to facilitate ecological and evolutionary studies of A. tatarica and its relatives. Sixteen novel microsatellite primers were developed for A. tatarica based on high-throughput sequencing of enriched libraries. All markers were polymorphic, with the number of alleles per locus ranging from 3 to 25 and observed and expected heterozygosity ranging from 0,10 to 0,90 and 0,10 to 0,76, respectively. Additionally, some of these loci were successfully amplified and showed polymorphisms in four Atriplex and seven Chenopodium species. The microsatellite markers published here will be useful in assessing genetic diversity, structuring and gene flow within and across populations of A. tatarica as well as other species of Atriplex and of the related genus Chenopodium.

  • Czech name

  • Czech description

Classification

  • Type

    J<sub>imp</sub> - Article in a specialist periodical, which is included in the Web of Science database

  • CEP classification

  • OECD FORD branch

    10611 - Plant sciences, botany

Result continuities

  • Project

    <a href="/en/project/GA15-06632S" target="_blank" >GA15-06632S: Impact of climatic suitability and population history on expansion at species’ range boundaries</a><br>

  • Continuities

    P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Others

  • Publication year

    2017

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Name of the periodical

    Applications in Plant Sciences 

  • ISSN

    2168-0450

  • e-ISSN

  • Volume of the periodical

    5

  • Issue of the periodical within the volume

    11

  • Country of publishing house

    US - UNITED STATES

  • Number of pages

    5

  • Pages from-to

    1-5

  • UT code for WoS article

    000416284400005

  • EID of the result in the Scopus database

    2-s2.0-85034591289