Characterization of the flexible genome complement of the commensal Escherichia coli strain A0 34/86 (O83:K24:H31)
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F05%3A00022215" target="_blank" >RIV/61388971:_____/05:00022215 - isvavai.cz</a>
Result on the web
—
DOI - Digital Object Identifier
—
Alternative languages
Result language
angličtina
Original language name
Characterization of the flexible genome complement of the commensal Escherichia coli strain A0 34/86 (O83:K24:H31)
Original language description
Colonization by the commensal Escherichia coli strain A0 34/86 (O83 : K24 : H31) has proved to be safe and efficient in the prophylaxis and treatment of nosocomial infections and diarrhoea of preterm and newborn infants in Czech paediatric clinics over the past three decades. In searching for traits contributing to this beneficial effect related to the gut colonization capacity of the strain, the authors have analysed its genome by DNA-DNA hybridization to E. coli K-12 (MG1655) genomic DNA arrays and to'Pathoarrays', as well as by multiplex PCR, bacterial artificial chromosome (BAC) library cloning and shotgun sequencing. Four hundred and ten E. coli K-12 ORFs were absent from A0 34/86, while 72 out of 456 genes associated with pathogenicity islands of E. coli and Shigella were also detected in E. coli A0 34/86
Czech name
Charakterizace flexibilní složky genomu komensálního kmene Escherichia coli A0 34/86 (O83 : K24 : H31)
Czech description
Kmen Escherichia coli A0 34/86 (O83 : K24 : H31) je komensální bakterie koužívaná ke kolonizaci střeva u rizikových nedonošenců a novorozenců. Ve snaze charakterizovat geny odpovídající za unikátní probiotické vlastnosti kmene jsme provedli částečnou sekvenaci jeho genomu. Přitom jsme identifikovali řadu potenciálních tzv. ?faktorů virulence?. Práce ukazuje jak tenká hranice je mezi faktory odpovědnými za schopnost kolonizace hostile a virulenci
Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
EE - Microbiology, virology
OECD FORD branch
—
Result continuities
Project
<a href="/en/project/IBS5020311" target="_blank" >IBS5020311: Vaccines for induction of mucosal and systemic immunity</a><br>
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)<br>Z - Vyzkumny zamer (s odkazem do CEZ)
Others
Publication year
2005
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Microbiology
ISSN
0001-9539
e-ISSN
—
Volume of the periodical
2005
Issue of the periodical within the volume
-
Country of publishing house
GB - UNITED KINGDOM
Number of pages
14
Pages from-to
385-398
UT code for WoS article
—
EID of the result in the Scopus database
—