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Bioinformatics for Microbiome Research: Concepts, Strategies, and Advances

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61388971%3A_____%2F17%3A00506523" target="_blank" >RIV/61388971:_____/17:00506523 - isvavai.cz</a>

  • Result on the web

    <a href="http://dx.doi.org/10.1007/978-3-319-59997-7_7" target="_blank" >http://dx.doi.org/10.1007/978-3-319-59997-7_7</a>

  • DOI - Digital Object Identifier

    <a href="http://dx.doi.org/10.1007/978-3-319-59997-7_7" target="_blank" >10.1007/978-3-319-59997-7_7</a>

Alternative languages

  • Result language

    angličtina

  • Original language name

    Bioinformatics for Microbiome Research: Concepts, Strategies, and Advances

  • Original language description

    Advances in next-generation sequencing technologies allow comparative analyses of the diversity and abundance of whole microbial communities, and of important ecosystem functional genes, at far greater depths than ever before. However, the current major challenge for the use of this immense amount of genetic information is undoubtedly how to convert the information into rational biological conclusions. As an attempt to solve this issue, we now rely on a set of complex computational/statistical analyses, the use of which, however, could be a drawback for most researchers in the biological sciences. In this chapter, we outline the main approaches applied for microbiome studies based on high-throughput sequencing technologies and we introduce the most commonly used strategies for data handling, sequence clustering, taxonomic and functional assignment, and microbial community comparisons. We also draw readers' attention to recent advances in the microbiome research field, illustrating the Brazilian case.

  • Czech name

  • Czech description

Classification

  • Type

    C - Chapter in a specialist book

  • CEP classification

  • OECD FORD branch

    10606 - Microbiology

Result continuities

  • Project

  • Continuities

    I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Others

  • Publication year

    2017

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Book/collection name

    The Brazilian Microbiome

  • ISBN

    978-3-319-59995-3

  • Number of pages of the result

    13

  • Pages from-to

    111-123

  • Number of pages of the book

    123

  • Publisher name

    Springer

  • Place of publication

    Cham

  • UT code for WoS chapter

    000439315400008