Nature and Magnitude of Aromatic Base Stacking in DNA and RNA: Quantum Chemistry, Molecular Mechanics, and Experiment
The result's identifiers
Result code in IS VaVaI
<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F61989592%3A15310%2F13%3A33148309" target="_blank" >RIV/61989592:15310/13:33148309 - isvavai.cz</a>
Alternative codes found
RIV/68081707:_____/13:00422442 RIV/00216224:14740/13:00072152
Result on the web
<a href="http://onlinelibrary.wiley.com/doi/10.1002/bip.22322/abstract" target="_blank" >http://onlinelibrary.wiley.com/doi/10.1002/bip.22322/abstract</a>
DOI - Digital Object Identifier
<a href="http://dx.doi.org/10.1002/bip.22322" target="_blank" >10.1002/bip.22322</a>
Alternative languages
Result language
angličtina
Original language name
Nature and Magnitude of Aromatic Base Stacking in DNA and RNA: Quantum Chemistry, Molecular Mechanics, and Experiment
Original language description
Base stacking is a major interaction shaping up and stabilizing nucleic acids. During the last decades, base stacking has been extensively studied by experimental and theoretical methods. Advanced quantum-chemical calculations clarified that base stacking is a common interaction, which in the first approximation can be described as combination of the three most basic contributions to molecular interactions, namely, electrostatic interaction, London dispersion attraction and short-range repulsion. Thereis not any specific - energy term associated with the delocalized electrons of the aromatic rings that cannot be described by the mentioned contributions. The base stacking can be rather reasonably approximated by simple molecular simulation methods based on well-calibrated common force fields although the force fields do not include nonadditivity of stacking, anisotropy of dispersion interactions, and some other effects. However, description of stacking association in condensed phase an
Czech name
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Czech description
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Classification
Type
J<sub>x</sub> - Unclassified - Peer-reviewed scientific article (Jimp, Jsc and Jost)
CEP classification
CF - Physical chemistry and theoretical chemistry
OECD FORD branch
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Result continuities
Project
Result was created during the realization of more than one project. More information in the Projects tab.
Continuities
P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)
Others
Publication year
2013
Confidentiality
S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů
Data specific for result type
Name of the periodical
Biopolymers
ISSN
0006-3525
e-ISSN
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Volume of the periodical
99
Issue of the periodical within the volume
12
Country of publishing house
US - UNITED STATES
Number of pages
11
Pages from-to
978-988
UT code for WoS article
000325089800007
EID of the result in the Scopus database
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