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Using Matlab in quantitative analysis of yeast growth

The result's identifiers

  • Result code in IS VaVaI

    <a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F67985556%3A_____%2F09%3A00332092" target="_blank" >RIV/67985556:_____/09:00332092 - isvavai.cz</a>

  • Result on the web

  • DOI - Digital Object Identifier

Alternative languages

  • Result language

    angličtina

  • Original language name

    Using Matlab in quantitative analysis of yeast growth

  • Original language description

    Quantitative growth analysis is used in microbiology, genetics and medical re- search to determine the in uence of the tested substance on the growth of colonies of some organism (we focus on yeast colonies in this paper). Examples of the tested substance include antibiotics, mutagens or medical drugs. To evaluate the experiment, time series of images of the colonies inoculated on Petri dishes are taken by digital camera in a darkroom. Then, relative area and the number of the colonies in each image have to be determined for further statistical processing. In the current laboratory practice, these parameters have often been hand-counted in each image, which is an error-prone process of a limited precision. Also, given the time demands of this hand-counting, the number of snapshots that can reasonably be processed is rather limited. In this paper, we introduce a Matlab-based tool for semi-automated processing of the dish images.

  • Czech name

  • Czech description

Classification

  • Type

    D - Article in proceedings

  • CEP classification

    JC - Computer hardware and software

  • OECD FORD branch

Result continuities

  • Project

    <a href="/en/project/1M0567" target="_blank" >1M0567: Centre for Applied Cybernetics</a><br>

  • Continuities

    Z - Vyzkumny zamer (s odkazem do CEZ)

Others

  • Publication year

    2009

  • Confidentiality

    S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Data specific for result type

  • Article name in the collection

    Technical Computing Prague 2009

  • ISBN

    978-80-7080-733-0

  • ISSN

  • e-ISSN

  • Number of pages

    9

  • Pages from-to

  • Publisher name

    Humusoft, s.r.o

  • Place of publication

    Praha

  • Event location

    Praha

  • Event date

    Nov 19, 2009

  • Type of event by nationality

    EUR - Evropská akce

  • UT code for WoS article