Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00023272%3A_____%2F23%3A10135740" target="_blank" >RIV/00023272:_____/23:10135740 - isvavai.cz</a>

Nalezeny alternativní kódy

RIV/67985939:_____/23:00577112 RIV/00216208:11310/23:10467892 RIV/00216224:14740/23:00132764

Výsledek na webu

<a href="https://www.sciencedirect.com/science/article/pii/S1055790322002792" target="_blank" >https://www.sciencedirect.com/science/article/pii/S1055790322002792</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1016/j.ympev.2022.107666" target="_blank" >10.1016/j.ympev.2022.107666</a>

Jazyk výsledku

angličtina

Název v původním jazyce

Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods

Popis výsledku v původním jazyce

Four main phylogenetic groups were recognised in all datasets though their mutual relationships differ among datasets. While group A (A. subulatum and A. petaloideum) is basal to the remaining groups in the nuclear gene phylogeny, in the cpDNA topology it is sister to group B (A. repoeense and related species) and, in the ITS topology, it is sister to group D (the Elettariopsis lineage). The former Elettariopsis makes a monophyletic group. There is an increasing trend in GS during evolution. The largest GS values were found in group D in two tetraploid taxa, A. cinnamomeum and A. aff. biphyllum (both 2n = 96 chromosomes). The remaining accessions varied considerably in GS (2C = 5.35-8.71 pg) with a constant chromosome number 2n = 48. There is a weak connection between phylogeny, GS and geography in Amomum.

Název v anglickém jazyce

Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods

Popis výsledku anglicky

Four main phylogenetic groups were recognised in all datasets though their mutual relationships differ among datasets. While group A (A. subulatum and A. petaloideum) is basal to the remaining groups in the nuclear gene phylogeny, in the cpDNA topology it is sister to group B (A. repoeense and related species) and, in the ITS topology, it is sister to group D (the Elettariopsis lineage). The former Elettariopsis makes a monophyletic group. There is an increasing trend in GS during evolution. The largest GS values were found in group D in two tetraploid taxa, A. cinnamomeum and A. aff. biphyllum (both 2n = 96 chromosomes). The remaining accessions varied considerably in GS (2C = 5.35-8.71 pg) with a constant chromosome number 2n = 48. There is a weak connection between phylogeny, GS and geography in Amomum.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

10611 - Plant sciences, botany

Projekt

Výsledek vznikl pri realizaci vícero projektů. Více informací v záložce Projekty.

Návaznosti

I - Institucionalni podpora na dlouhodoby koncepcni rozvoj vyzkumne organizace

Rok uplatnění

2023

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Molecular Phylogenetics and Evolution

ISSN

1055-7903

e-ISSN

—

Svazek periodika

178

Číslo periodika v rámci svazku

107666

Stát vydavatele periodika

US - Spojené státy americké

Počet stran výsledku

14

Strana od-do

1-14

Kód UT WoS článku

000929726100005

EID výsledku v databázi Scopus

—