The complete mitochondrial genome of Glycyphagus domesticus (Acari: Glycyphagidae) using next-generation sequencing: Insight into phylogeny of Acariformes

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00027006%3A_____%2F21%3A10174321" target="_blank" >RIV/00027006:_____/21:10174321 - isvavai.cz</a>

Výsledek na webu

<a href="https://www.sciencedirect.com/journal/journal-of-stored-products-research/vol/93/suppl/C" target="_blank" >https://www.sciencedirect.com/journal/journal-of-stored-products-research/vol/93/suppl/C</a>

DOI - Digital Object Identifier

<a href="http://dx.doi.org/10.1016/j.jspr.2021.101818" target="_blank" >10.1016/j.jspr.2021.101818</a>

Jazyk výsledku

angličtina

Název v původním jazyce

The complete mitochondrial genome of Glycyphagus domesticus (Acari: Glycyphagidae) using next-generation sequencing: Insight into phylogeny of Acariformes

Popis výsledku v původním jazyce

Glycyphagus domesticus (Acari: Glycyphagidae) is a pest mite with worldwide distribution. It damages stored products and produces allergens. Molecular diagnosis is important for the effective monitoring and control of stored-products and dust pest mites. The complete mitochondrial genome (mt genome) has become one of the most useful markers for molecular systematics, phylogenetics and diagnostics of stored-pest mites. In this study, next-generation sequencing was used to sequence the complete mt genome of G. domesticus. The complete mt genome was found to be 14,333 bp in size, containing 13 protein coding genes, 2 ribosomal RNA (rRNA) genes and 22 transfer RNA (tRNA) genes. We constructed phylogenetic trees based on concatenated thirteen proteincoding genes and two rRNAs genes. Our overall results showed that G. domesticus was found in its own separate clade from the 29 other mite species, which is likely due to the fact that this represents the first assembled mt genome of a member of the family Glycyphagidae. Overall, our study enriches the growing mt genome database for the Acariformes and will promote further studies.

Název v anglickém jazyce

The complete mitochondrial genome of Glycyphagus domesticus (Acari: Glycyphagidae) using next-generation sequencing: Insight into phylogeny of Acariformes

Popis výsledku anglicky

Glycyphagus domesticus (Acari: Glycyphagidae) is a pest mite with worldwide distribution. It damages stored products and produces allergens. Molecular diagnosis is important for the effective monitoring and control of stored-products and dust pest mites. The complete mitochondrial genome (mt genome) has become one of the most useful markers for molecular systematics, phylogenetics and diagnostics of stored-pest mites. In this study, next-generation sequencing was used to sequence the complete mt genome of G. domesticus. The complete mt genome was found to be 14,333 bp in size, containing 13 protein coding genes, 2 ribosomal RNA (rRNA) genes and 22 transfer RNA (tRNA) genes. We constructed phylogenetic trees based on concatenated thirteen proteincoding genes and two rRNAs genes. Our overall results showed that G. domesticus was found in its own separate clade from the 29 other mite species, which is likely due to the fact that this represents the first assembled mt genome of a member of the family Glycyphagidae. Overall, our study enriches the growing mt genome database for the Acariformes and will promote further studies.

Druh

J_imp - Článek v periodiku v databázi Web of Science

CEP obor

—

OECD FORD obor

40106 - Agronomy, plant breeding and plant protection; (Agricultural biotechnology to be 4.4)

Projekt

<a href="/cs/project/LTACH19029" target="_blank" >LTACH19029: Invazivní mechanismy hospodářsky významných skladištních hmyzích škůdců ohrožujících čínský a evropský mezinárodní obchod a systémy fytosanitární techniky pro jejich omezování</a><br>

Návaznosti

P - Projekt vyzkumu a vyvoje financovany z verejnych zdroju (s odkazem do CEP)

Rok uplatnění

2021

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

JOURNAL OF STORED PRODUCTS RESEARCH

ISSN

0022-474X

e-ISSN

—

Svazek periodika

93

Číslo periodika v rámci svazku

SEP 2021

Stát vydavatele periodika

GB - Spojené království Velké Británie a Severního Irska

Počet stran výsledku

7

Strana od-do

101818

Kód UT WoS článku

000686135700007

EID výsledku v databázi Scopus

2-s2.0-85108149924