Detekce antimikrobního peptidu u různých zástupců rodu Amaranthus

Kód výsledku v IS VaVaI

<a href="https://www.isvavai.cz/riv?ss=detail&h=RIV%2F00027162%3A_____%2F08%3A%230000329" target="_blank" >RIV/00027162:_____/08:#0000329 - isvavai.cz</a>

Výsledek na webu

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DOI - Digital Object Identifier

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Jazyk výsledku

angličtina

Název v původním jazyce

Detection of the antimicrobial peptide gene in different Amaranthus species

Popis výsledku v původním jazyce

Antimicrobial peptide gene was found to be present in seven species of the Amaranthus genus (A. albus, A. cruentus, A. blitum, A. hybridus, A. hypochondriacus, A. retroflexus and A. tricolor), in which it had not been described previously. Sequencing ofPCR products showed almost identical sequences in all cases, except for two polymorphisms. These single nucleotide polymorphisms occurred at nucleotide positions 45 and 246. Regarding both polymorphisms lay outside the region encoding the chitin-bindingdomain, which is crucial for peptide function, they will not likely affect the proper functioning of the peptide. With the exception of the above-mentioned polymorphisms, all sequences were identical to the sequence of the AMP2 gene which encodes Ac-AMP2antimicrobial peptide previously found in A. caudatus. The detection of sequences with high degree of similarity to A. caudatus AMP2 gene leads us to the assumption that an antimicrobial peptide could also be produced by other amaranth s

Název v anglickém jazyce

Detection of the antimicrobial peptide gene in different Amaranthus species

Popis výsledku anglicky

Antimicrobial peptide gene was found to be present in seven species of the Amaranthus genus (A. albus, A. cruentus, A. blitum, A. hybridus, A. hypochondriacus, A. retroflexus and A. tricolor), in which it had not been described previously. Sequencing ofPCR products showed almost identical sequences in all cases, except for two polymorphisms. These single nucleotide polymorphisms occurred at nucleotide positions 45 and 246. Regarding both polymorphisms lay outside the region encoding the chitin-bindingdomain, which is crucial for peptide function, they will not likely affect the proper functioning of the peptide. With the exception of the above-mentioned polymorphisms, all sequences were identical to the sequence of the AMP2 gene which encodes Ac-AMP2antimicrobial peptide previously found in A. caudatus. The detection of sequences with high degree of similarity to A. caudatus AMP2 gene leads us to the assumption that an antimicrobial peptide could also be produced by other amaranth s

Druh

J_x - Nezařazeno - Článek v odborném periodiku (Jimp, Jsc a Jost)

CEP obor

EB - Genetika a molekulární biologie

OECD FORD obor

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Projekt

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Návaznosti

Z - Vyzkumny zamer (s odkazem do CEZ)

Rok uplatnění

2008

Kód důvěrnosti údajů

S - Úplné a pravdivé údaje o projektu nepodléhají ochraně podle zvláštních právních předpisů

Název periodika

Biologia

ISSN

0006-3088

e-ISSN

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Svazek periodika

63

Číslo periodika v rámci svazku

2

Stát vydavatele periodika

PL - Polská republika

Počet stran výsledku

4

Strana od-do

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Kód UT WoS článku

000254045700016

EID výsledku v databázi Scopus

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